Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5637 |
Symbol | apbE |
ID | 4042501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 2397261 |
End bp | 2398274 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637981056 |
Product | ApbE-like lipoprotein, membrane-associated lipoprotein involved in thiamine biosynthesis |
Protein accession | YP_587765 |
Protein GI | 94314556 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.85012 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCGCG TTCTTATCCC CGCCACGCTG GACCTGCCCC CGCCCGTTCG CGAGCCGCAA GGCTCGATCG CGCAATGGAC GGGCGAGACG ATGGGGACGA CCTGGGCTGT CCGCGCCGTG CTGGCGCGCG GGCAGGACGG CGGCGGCCTG GAGGCAGGCA TCCGCGCGGT GCTCGACGAG GTTATCGCGC AGATGAGCAA CTGGTCCGAG ATATCGGACC TGAGCCGTTT CAATCGGGCC GACGCCAGTG CTTGGGTCAC GCTGCCCGAG GATTGCTTCA CGGTCCTGCA GGCGGCGCTG GACACCGCGC GCGACAGCGG TGGCGCCTAC GATCCCAGTG CCGGCCCGCT CGTCGATCTC TGGGGCTTCG GCCCGGCTGG CAAACGGCAC ACCGCGCCTA CCGCCGATGA CGTGGCACGG GCGCGCCAGC ATTGCGGCTG GCAACGGATC GAGATCGACC CATCGGCGCG TCGCGCGCGC CAGCCGGGCG GACTGTCACT CGATTTCTGC GCGATCGCGA AGGGGTTTGC CGTCGATGCG GTATCGCGCT ATCTCCTGGC CCAGGGCGTG CCGCATCATC TGGTCGAGAT CGGCGGCGAG TTGCGCGGCC AGGGGCTGAA GCCCGATGGG ATGCCGTGGT GGATCGAACT GGAGTCCCCC TCGGCATCTG CCACTGCTGC GGGCGGGATC AGACGTACGC TGGTGGCGTT GCTCGGCCTG TCGATCGCCA CGTCGGGCGA CTACCGCCGC TACTTCGAAC ACGATGGGCG GCGGTACGCG CATACGATTG ATCCACGCAC CGGCTACCCG GCCGCGCATG CGTTGGCGTC CGTCACGGTG CTCCATCGCG AATGCATGAT GGCCGACGCG TTGTCCACCG CACTGACCGT GCTCGGGCCA GAAGCCGGCA TCACCTTCGC CACGCGCCAG GGCCTGGCTG CCCGCTTCCT GGTGCGCACG CCGCACGGCT TCGATGAGCG GGTCACCCCG GCGTTCGCCG CGATGCAAAC ATGA
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Protein sequence | MNRVLIPATL DLPPPVREPQ GSIAQWTGET MGTTWAVRAV LARGQDGGGL EAGIRAVLDE VIAQMSNWSE ISDLSRFNRA DASAWVTLPE DCFTVLQAAL DTARDSGGAY DPSAGPLVDL WGFGPAGKRH TAPTADDVAR ARQHCGWQRI EIDPSARRAR QPGGLSLDFC AIAKGFAVDA VSRYLLAQGV PHHLVEIGGE LRGQGLKPDG MPWWIELESP SASATAAGGI RRTLVALLGL SIATSGDYRR YFEHDGRRYA HTIDPRTGYP AAHALASVTV LHRECMMADA LSTALTVLGP EAGITFATRQ GLAARFLVRT PHGFDERVTP AFAAMQT
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