| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5602 |
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| Symbol | |
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| ID | 4042466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 2356033 |
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| End bp | 2357124 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637981021 |
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| Product | putative threonine dehydratase |
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| Protein accession | YP_587730 |
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| Protein GI | 94314521 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTTAA CCCATCCCCT TGCCGTGCCC CAAGCCGTTG CGCCGGGCCA GTCGTTCGAT
GCCGAGCCGT TTGAAGCGGC ACACGACGCC TGGAGCGACG CCGACGATTA CCTGAGGCGC
ATCCTGACCG CGCGCGTCTA CGACGTGGCA CGGGAGACCG CGCTGGAGGC GGCGCCGACC
TTGTCCGCGC ATCTCGGCCA CCGCGTCTGG CTCAAGCGCG AGGATCACCA GCCCGTGTTT
TCGTTCAAGG TGCGCGGCGC CTACAACAAG ATGGCCAGCC TGCCGGCCGA TGCGCTTGCC
CGTGGCGTGA TCACGGCCTC AGCCGGCAAT CACGCGCAAG GCGTGGCGCT GGCCGCGGCC
CGGCTTGGTG TGCGGGCGAT CATCGTCGTG CCGCAATCCG CGCCGCAGGT GAAGGTGGAT
GCGGTGCGTG CCCACGGTAG CGGGATGGTG GAAGTCGTGC TGGCCGGCGA GTCCTATTCC
GATGCCTTCG ACCATGCGCT ATCCCTGCAG CAACAACACG GACTGACGTT CATCCCGGCG
TTCGACGATC CCGACGTCAT CGCCGGGCAA GGAACCGTGG GCATGGAGAT CCTGCGGCAG
CATCGCGGTC CGCTTGATGC CGTGTTCGTG CCGATCGGCG GTGGCAGCCT GGCAGCAGGC
GTGGCGGCAT ATGTCAAGGC GGTCCGGCCG GAAGTCCAGG TCATCGGCGT GCAAACGGAG
GATTCCTGCG CCATGGCGCG TTCGCTGGCC GCTGGCGAGC GGGTCACGCT CGATACCGTG
GGATTGTTCT CGGATGGCAC GGCGGTCAAG CGCGTCGGGG AAGAGACGTT TCGGCTTTGC
CAGAAGTACC TTGATGGCGT GCTGACGGTG GATACCGATG CGCTCTGCGC GGCGATCAAG
GACATCTTCC AGGACACGCG CAGCCTGGTG GAGCCGGCCG GCGCGCTGGC CGTGGCGGGG
CTCAAGCAGT ATGCGGCGAC GGCGGGCAAC GCCTCGCTGG CGCTGGTCGC GATCACATCG
GGCGCCAATA TGAACTTTGA CCGCTTGCGC ATCGTGGCGG AGCGGGCGGA AGTGGTTGGC
GCCGCACGAT GA
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| Protein sequence | MPLTHPLAVP QAVAPGQSFD AEPFEAAHDA WSDADDYLRR ILTARVYDVA RETALEAAPT
LSAHLGHRVW LKREDHQPVF SFKVRGAYNK MASLPADALA RGVITASAGN HAQGVALAAA
RLGVRAIIVV PQSAPQVKVD AVRAHGSGMV EVVLAGESYS DAFDHALSLQ QQHGLTFIPA
FDDPDVIAGQ GTVGMEILRQ HRGPLDAVFV PIGGGSLAAG VAAYVKAVRP EVQVIGVQTE
DSCAMARSLA AGERVTLDTV GLFSDGTAVK RVGEETFRLC QKYLDGVLTV DTDALCAAIK
DIFQDTRSLV EPAGALAVAG LKQYAATAGN ASLALVAITS GANMNFDRLR IVAERAEVVG
AAR
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