Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5585 |
Symbol | |
ID | 4042449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 2337770 |
End bp | 2339212 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637981004 |
Product | major facilitator protein family permease |
Protein accession | YP_587713 |
Protein GI | 94314504 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGGGG CGTATGGCTG TGGCAGGGGC GAATGGCACC ATTACAGCAT GGCTCGCCGT CTCTTGCCAT GCGTTCAGCG CATGACAAAA CGCCCGAAAT GTCGGTTGAA CCGCCGCACC GGTGCGCATG AAATGGAGGA CATTCAACGC CTTCATCCGA CCGACAGCAT GACCGACGCT CCCCGCTCCC ATACTCGTGC CGCATCGCAG CCCGCGGCCC CGGCGCCATG GTGGCGCGAT ACCGTCTTCC TGTTGCTGGC CGGCGGGCTG GTCATGGGGC TGGCGCTGGG CGCGCGGCAC GTGCAAGGGC TGTTCCTGCT GCCGATCATC GGCGACCGAG GCTGGACGCG TGAGTCGATT GGCTTGGCCA TGGCCGTGCA AAACCTGACC TGGGGCATCG CGCAACCATT CACTGGCATG GTGGCCGACC GGTTCGGCTC CTGGAAGGTG ATGCTGGCCG GTCTGGTGCT GTACGCGCTG GGCCTCTACG GGATGGCGGT GATCACGAGC GCGCCGGCAT TCATGCTGGT CGCCGGGGTT TGCATCGGCG TGGCGCAGTC TGGGACGACG TTCGGCGTGG TCTATGGCGC GCTGAGCCGC ATGGTGCCGC CAGAGGACCG CAGCCGCACG CTGGGCATCG CCGGGGCGAT CGGTGGCATC GGCCAGTTCC TGATGGTGCC GTCCGCGCAG GCGCTGTTGT CGTTCACCGG CTGGACGAAC GCGCTGATGG TGCTGGCGGT ATGCGCGGCG GTGTTGATCC CGTTCGCGTT GCCGTTCCGC GATCGCGCGC CGGCATCCGA TGCTGCTACC GGCGGCCAGC CACCGATGCC GATGCTGGCC GCCATCCGCG AGGCTTTCAG CCACTCGGGC TTCTGGCTGC TCAACCTCGG CTTCCTGGCA TGTGGCTTCC AATTGGCCTT TATCGCCAAC CATCTGCCCG CCTACCTGCG TGACAAGGGG ATGCAGCCCG CTGACGGCAT GGCCGCGCTG GCCATCATCG CGCTGGCCAA TATCTTCGGC ACCTATGTGT TCGGCTGGCT GGGCGGGCGA CATACGCGGA AGTACCTGCT GGCCGGCATC TATCTGGCGC GTACGTCGGC AATGGCCCTG TTCGTGCTGC TGCCCCTGAG CTCGATGAGC CTGTATGCGT TCGCAGCGGT GATGGGCTTC CTGTGGCTCG GTACGGTGCC GCTGACCAGC GGCATCGTCT CCCAGGTGTT CGGCGTGCGC TACATCACCA CGCTGTTCGG CTTCGTCTTC TTCGGCCACC AGCTTGGCTC GTTTCTGGGC GTGTGGCTGG GTGGGGTGGT GTTCGAGCTG ACGCGGTCCT ATGACCTGGT CTGGATGGGG GCGATGGCAC TGGGCGTGAT CGCCGCCGCG CTGCACTGGC CGATTGACGA TCGGACGATC GCGCGCGTGC CGATGCGCCC GGCACGGGCA TGA
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Protein sequence | MTGAYGCGRG EWHHYSMARR LLPCVQRMTK RPKCRLNRRT GAHEMEDIQR LHPTDSMTDA PRSHTRAASQ PAAPAPWWRD TVFLLLAGGL VMGLALGARH VQGLFLLPII GDRGWTRESI GLAMAVQNLT WGIAQPFTGM VADRFGSWKV MLAGLVLYAL GLYGMAVITS APAFMLVAGV CIGVAQSGTT FGVVYGALSR MVPPEDRSRT LGIAGAIGGI GQFLMVPSAQ ALLSFTGWTN ALMVLAVCAA VLIPFALPFR DRAPASDAAT GGQPPMPMLA AIREAFSHSG FWLLNLGFLA CGFQLAFIAN HLPAYLRDKG MQPADGMAAL AIIALANIFG TYVFGWLGGR HTRKYLLAGI YLARTSAMAL FVLLPLSSMS LYAFAAVMGF LWLGTVPLTS GIVSQVFGVR YITTLFGFVF FGHQLGSFLG VWLGGVVFEL TRSYDLVWMG AMALGVIAAA LHWPIDDRTI ARVPMRPARA
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