Gene Rmet_5549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5549 
SymbolpobB 
ID4042410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2296516 
End bp2297481 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content59% 
IMG OID637980967 
Productphenoxybenzoate dioxygenase subunit beta 
Protein accessionYP_587677 
Protein GI94314468 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGA ACACCTCGCA AATTGAACTT CGACTGAAGC GAATCACGTT CGAAGCAGAG 
CGCATCTCTT CGTTCGAATT TGTTTCCGCT GATGCGAATC CCTTACCGGG CTTCCAACCC
GGCGCACACA TCGACCTGCA TCTCCAACAG GGAATGATCC GCAGCTATTC CCTTGCCAAT
GCAGCGTCGG CAGATCCTTT GTATTACCGT GTCGCCGTCC AGCGCGAACC CAATGGCCGA
GGTGGCTCCC GCTGGGCCCA CGACAAACTC CGCGTGGGTG ACAAGGTCTG GGCCACGCCT
CCACAGAACG ACTTCCCCCT TGACGAATGT GCGTCGAGCA CCGTTTTCTT CGTGGGCGGC
ATCGGAATTA CCCCTGTCCT TCCGATGCTC CGCAGACTCG ACGCCATCGG CCGAGAATGG
AAGTTGATGT ACGCCAGCCG TTCACCGGGC GAAACCGCCT TCGCCGAAGA GCTCCAGCGC
ATCGATGCCG GGCGAGGCCG GATTGTCCAT TTTCATGATT CCGAGCCTGG TCAGCGTCTG
GAGATCCGTG CCACGGTTGC AGCACTGCCC GCTTCAACGC ATGTGTACTG CTGCGGCCCC
ACCGGCATGA TTGACGACTT CCTGGCAGTC ACCGCCGAGC GAGACCCGTC CACAGTTCAC
TACGAACGCT TCGGTGCAGC CCAACAGGCG GCAACGGAGG GCGGCTTTGA TGTGGTCTTG
CATAGGAGTG GCGCAAAGTA CCGCGTGGAG CCCGGCAAGA CCATCCTGGA TGTGCTGTTA
GATAATAACG TTGCAGTGCC CTATTCCTGT TGCAACGGCG TCTGCGGAAG CTGCCGGACG
GAGATCATCG ATGGTCAAGC CGACCATCGC GATGACTTCC TCAGTGACGA AGAGAAGCAG
GCCAACCAGG CCATCATGGT TTGCTGCTCT GGCGCACGCT CCAAGACGCT AGTGCTAGAC
CTTTGA
 
Protein sequence
MSMNTSQIEL RLKRITFEAE RISSFEFVSA DANPLPGFQP GAHIDLHLQQ GMIRSYSLAN 
AASADPLYYR VAVQREPNGR GGSRWAHDKL RVGDKVWATP PQNDFPLDEC ASSTVFFVGG
IGITPVLPML RRLDAIGREW KLMYASRSPG ETAFAEELQR IDAGRGRIVH FHDSEPGQRL
EIRATVAALP ASTHVYCCGP TGMIDDFLAV TAERDPSTVH YERFGAAQQA ATEGGFDVVL
HRSGAKYRVE PGKTILDVLL DNNVAVPYSC CNGVCGSCRT EIIDGQADHR DDFLSDEEKQ
ANQAIMVCCS GARSKTLVLD L