| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5546 |
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| Symbol | vanA |
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| ID | 4042407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 2292700 |
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| End bp | 2293743 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637980964 |
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| Product | putative vanillate O-demethylase oxygenase subunit (4-hydroxy- 3-methoxybenzoate demethylase) |
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| Protein accession | YP_587674 |
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| Protein GI | 94314465 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACCTCA AAAACGCCTG GTATGTGGCC GGCTGGAATT CGGAATTTCA AAAGGACCAG
CTGGTTTCCC GTCGACTTCT CGGTCAAGAC ATCGTGTTCT ATCGTCGCGG TGATGGATCA
GTTGCCGCGC TGGAGGACAG GTGTTGTCAT CGCGCCGCGC CGTTGTCCAA AGGGCAGCAG
GAAGGTGACC AAATCCGCTG CATGTATCAC GGTCTTCTGT TCAACTGCGC GGGCCAATGC
GTGGAGGTTC CTGGGCAGGA GCGGATCTCC GACAAACTCA AGGTCCGCAG TTTTCCGACA
GAAGTTCGGG ACAATCTTGT CTGGATCTGG ATGGGGCAGC CAGAGCTGGC TGACGCTTCG
GAAATCAAGC AGGTGCATTG GCACAATCGT GAGGGATGGC GTGTCGAGGA GGGCGGATAT
CTCCGTTATG CCTCGGGCGT CCAGTTGATT GTTGACAATC TGCTGGATTT CTCGCATTTG
GGCTTCGTTC ACAACAAGTC CATCGGCACG CGTAAGCAAG GGAATATCCG TCCGGAGACC
GAGTTCCAGG GCGAAACGGT GTCGGTCAGA TTCACAACGC TAGGCAGTCC GCCCCCGGCT
TTTGCTCGAG AACTCGGTCA GTTGCCGGAG AACGTAGATC GCTTTAACTA CTACGTTTGG
CACATCCGGG GAAATCTCTT CGTGCAGGAC TCGGTCATCG CTCCGGTAGG GGAGGGATAT
GAGAGCCTTG ATCCCGCCAC CATGAAGCTG CACACGTTCA TTGCTTTGAC GCCATGCGAC
GAAAACACTG CCCACTACTT CTGGGCGACA GCTCACAACA ATTTTACGTC GACAACCGAG
GATTTGACAC GCCGTCTGAC AGAGCAGGTC GCCCACGCTT TTGATGAAGA TCGAGAAATT
ATCGAGGCAC AACAGGCGGT TATTTCGACG GCACCTGATG CGCCGATGGT CGCCATTGCC
GCAGACGGCA CTCTGCTGAA GGTACGCCGC ATGCTGGACG CCCTCCTGCT GGAAGAACGT
TCGCCCAAAG CGGCGACGCA ATAA
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| Protein sequence | MYLKNAWYVA GWNSEFQKDQ LVSRRLLGQD IVFYRRGDGS VAALEDRCCH RAAPLSKGQQ
EGDQIRCMYH GLLFNCAGQC VEVPGQERIS DKLKVRSFPT EVRDNLVWIW MGQPELADAS
EIKQVHWHNR EGWRVEEGGY LRYASGVQLI VDNLLDFSHL GFVHNKSIGT RKQGNIRPET
EFQGETVSVR FTTLGSPPPA FARELGQLPE NVDRFNYYVW HIRGNLFVQD SVIAPVGEGY
ESLDPATMKL HTFIALTPCD ENTAHYFWAT AHNNFTSTTE DLTRRLTEQV AHAFDEDREI
IEAQQAVIST APDAPMVAIA ADGTLLKVRR MLDALLLEER SPKAATQ
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