Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5533 |
Symbol | |
ID | 4042394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 2279861 |
End bp | 2280553 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637980951 |
Product | nitroreductase |
Protein accession | YP_587661 |
Protein GI | 94314452 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 58 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTATTC GAGAGCAACT GCCGAGCGTC GTGCTCGAAG GGCTTCTTGC AGCCCGGCAT AGCTGCCGTG CATTTCTACC AGACGAGGTG CCACAAGACA TCGTCGAACG CATCGTATCT CTCGCGCAGC GTACGGCGTC ATGGTGCAAT GCGCAACCAT GGCAGGTAGT CATTACGAGA GGGGCGGCCA CTGATAGATT TCGAGAGGTG ATGCTGGCGC CGAGTGAATC GGACGATGAG AAGCGACCTG ACTTTGAATG GCCGCGGGAG TACCAGGGGG TGTATCAGGA GCGTCGCCGT GAATGCGGTC TGGCGCTTTA CGATGCAGTT GGCGTGGCGC GTGGAGATCG GGAAGCGTCA ACCCGCCAAG CGCGCGAGAA CTTTCGTCTT TTCGGCGCCC CACATGTGGC GATCATCACT AGCGATGAGG CGCTCTCCAC ATATGGTGCT GTGGATTGCG GTGGATATGT CGCCAACTTC ATGCTCGCAG CCACGAGCCT TGGTGTAGCG ACCATCGCCC AGGCAGCGTT GGCGGCCCGA CCACATCGGG TGCGCGAATG CCTGGGCCTG CCGGCCAGTC GACGGATTGT GTGCGGGATC TCATTTGGCT ACCCCGACAC CCACCATCCT GCAAACGGCT TTCGGACTAG TCGTGCCGAG TTGTCGTCCG CAGTCAAATG GCTTGATGCC TGA
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Protein sequence | MSIREQLPSV VLEGLLAARH SCRAFLPDEV PQDIVERIVS LAQRTASWCN AQPWQVVITR GAATDRFREV MLAPSESDDE KRPDFEWPRE YQGVYQERRR ECGLALYDAV GVARGDREAS TRQARENFRL FGAPHVAIIT SDEALSTYGA VDCGGYVANF MLAATSLGVA TIAQAALAAR PHRVRECLGL PASRRIVCGI SFGYPDTHHP ANGFRTSRAE LSSAVKWLDA
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