Gene Rmet_5533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5533 
Symbol 
ID4042394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2279861 
End bp2280553 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content60% 
IMG OID637980951 
Productnitroreductase 
Protein accessionYP_587661 
Protein GI94314452 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATTC GAGAGCAACT GCCGAGCGTC GTGCTCGAAG GGCTTCTTGC AGCCCGGCAT 
AGCTGCCGTG CATTTCTACC AGACGAGGTG CCACAAGACA TCGTCGAACG CATCGTATCT
CTCGCGCAGC GTACGGCGTC ATGGTGCAAT GCGCAACCAT GGCAGGTAGT CATTACGAGA
GGGGCGGCCA CTGATAGATT TCGAGAGGTG ATGCTGGCGC CGAGTGAATC GGACGATGAG
AAGCGACCTG ACTTTGAATG GCCGCGGGAG TACCAGGGGG TGTATCAGGA GCGTCGCCGT
GAATGCGGTC TGGCGCTTTA CGATGCAGTT GGCGTGGCGC GTGGAGATCG GGAAGCGTCA
ACCCGCCAAG CGCGCGAGAA CTTTCGTCTT TTCGGCGCCC CACATGTGGC GATCATCACT
AGCGATGAGG CGCTCTCCAC ATATGGTGCT GTGGATTGCG GTGGATATGT CGCCAACTTC
ATGCTCGCAG CCACGAGCCT TGGTGTAGCG ACCATCGCCC AGGCAGCGTT GGCGGCCCGA
CCACATCGGG TGCGCGAATG CCTGGGCCTG CCGGCCAGTC GACGGATTGT GTGCGGGATC
TCATTTGGCT ACCCCGACAC CCACCATCCT GCAAACGGCT TTCGGACTAG TCGTGCCGAG
TTGTCGTCCG CAGTCAAATG GCTTGATGCC TGA
 
Protein sequence
MSIREQLPSV VLEGLLAARH SCRAFLPDEV PQDIVERIVS LAQRTASWCN AQPWQVVITR 
GAATDRFREV MLAPSESDDE KRPDFEWPRE YQGVYQERRR ECGLALYDAV GVARGDREAS
TRQARENFRL FGAPHVAIIT SDEALSTYGA VDCGGYVANF MLAATSLGVA TIAQAALAAR
PHRVRECLGL PASRRIVCGI SFGYPDTHHP ANGFRTSRAE LSSAVKWLDA