| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5488 |
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| Symbol | |
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| ID | 4042349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 2230725 |
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| End bp | 2232521 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637980906 |
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| Product | putative nucleoside triphosphate hydrolase domain-containing protein |
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| Protein accession | YP_587616 |
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| Protein GI | 94314407 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 55 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTGA AGCGCATCTA TATCAGCAAC TTCCGCAACT TCGAACAGAT TGACGTTGCA
TTGGACGGAA GTGTAGTTGT GGTCGGCGAA AACAGGGTTG GCAAGAGCAA CCTGCTCTTC
GCCCTGCGCC TTATCTTGGA TCCGAGCCTC CCTGATAGCG CTCGCCAGTT GGGGCAAGGG
GATTTTTGGG ATGGCCTAGG TGAGCCTCTA GAGGACGAGC GCATTACCGT GTTCGTCGAA
CTCATTGAGT TTGCTAACGA CATGGATTTG CTTGCTGTCC TGACCGACTA TCGGCTGGAC
GATGACCCTG ACACCGTGCG GCTAACCTAT GAGTTCCGGC CTATCGCCGG CCTCGCTGGG
TTTCCGCAGG CTGATGAGGA TTATGAGTTC ATCTGTTTCG GGGGAGAGTC GGAGAATAAG
CGGTTTGGGC ACGATGTGCG CCGGCGTGTT GCAATGGACC TGCTTCCAGC CTTGCGAGAT
GCTGAGGGTG ACCTTGCAGT TTGGCGCCGT TCGCCACTTC GGCCTTTGCT AGAGCGCGCA
TTTGCGGAAG TTCCCAGCCA AGACCTCGGG CAAGTGAGGG ATGTGGTTCA GCAAGCAACG
CAGCAACTGG CCGAATTCCC GACGGTGCAG GCTCTCCAGC AGCGTTTGAG AGACCTCTTC
GTCTCCATGA GCGGTCCTAA ACAGGACATT CAGCCAGCTC TCGGCTTCGG CACCACCGAC
GTAACCAGGC TCATCAGAAA TTTGAAGCTG CTCATCGATG GCGGCCTCAG AACCATTGGT
GATGCGAGCT TAGGGTCGGC CAACGTGGCG TTTCTAACCC TTAAGGCCCT CGAACTGCAG
CAGTTGATGA GTGAAAACCG TCGGGACCAC ACGGTGCTGG CCATCGAGGA ACCTGAAGCT
CATCTGCATC CTCACTTGCA ACGATCTGTA TATCGACATC TATTTGAGGA TTTGGCCGGA
GCACAAGGTG AACAACTCTC CCTTATGCTT ACAACACACT CGCCGCATAT CGCGAGTGTG
GCGCCTCTGA GGTCCCTTGT TCTATTGCGA GAGTCTCCGC AGAACGGCAC TGTGGGGACA
TCCTCTGCAG AAATTTCTCT CACCGAGGAT GAAGAAGATG ACCTCGCTCG CTATCTCGAC
GTTACGCGGG CAGAAATGCT GTTTGCTAGA GGCATCATCT TGGTCGAGGG CGACGCTGAG
AAGTTCTTGT TGCCTGTGAT GGCCGCTTCG ATGGGGCACG ACCTTGACCA TCTGGGTATT
ACGATATGCT CGGTGTCGGG AACGAACTTC ACTCCCTATG CGAAGTTCCT CACGGCGTTG
GGCATCCCAT TTTCCATCAT TACGGACTGG GACCCAAGAG TGGGGAAGAA GCCGCTAGGT
TTTAACCGCT CATGGCGTCT GGTCGAGAGC ATCGAGCAGA CACTTACAGG AGTTGCGCAG
CCGAAATTGG TTCAGGAACT CGTCGCCATA GCCGACTACG ATGACTTCTG TTTGCGATGC
GAGGACTTCG GCATCTTTTC AAACTTCGTC ACGTTGGAAG TCGACTTGTT TGATGACCAA
GATTTTACCG GCGAGATCAT CGCAACCCTT CGAGAGTCGA ATTGGAGCGA GGAACGCCGT
GCGTGGATCG ACGCATGGGA GGACGACCCT GACAAGTTGA ACGCCGAGAA TTATTTGAAA
CTTATCGATG GTGTCGGAAA GGGGCGTTTT GCCCAGAGGC TAGCGTCAAA GATTGTGGGT
GCCATCCCTC CTGAATACAT ATCTAAAGCG ATCTCCTACG TAGTCAATCG TGTCTAA
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| Protein sequence | MKLKRIYISN FRNFEQIDVA LDGSVVVVGE NRVGKSNLLF ALRLILDPSL PDSARQLGQG
DFWDGLGEPL EDERITVFVE LIEFANDMDL LAVLTDYRLD DDPDTVRLTY EFRPIAGLAG
FPQADEDYEF ICFGGESENK RFGHDVRRRV AMDLLPALRD AEGDLAVWRR SPLRPLLERA
FAEVPSQDLG QVRDVVQQAT QQLAEFPTVQ ALQQRLRDLF VSMSGPKQDI QPALGFGTTD
VTRLIRNLKL LIDGGLRTIG DASLGSANVA FLTLKALELQ QLMSENRRDH TVLAIEEPEA
HLHPHLQRSV YRHLFEDLAG AQGEQLSLML TTHSPHIASV APLRSLVLLR ESPQNGTVGT
SSAEISLTED EEDDLARYLD VTRAEMLFAR GIILVEGDAE KFLLPVMAAS MGHDLDHLGI
TICSVSGTNF TPYAKFLTAL GIPFSIITDW DPRVGKKPLG FNRSWRLVES IEQTLTGVAQ
PKLVQELVAI ADYDDFCLRC EDFGIFSNFV TLEVDLFDDQ DFTGEIIATL RESNWSEERR
AWIDAWEDDP DKLNAENYLK LIDGVGKGRF AQRLASKIVG AIPPEYISKA ISYVVNRV
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