| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5455 |
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| Symbol | tnpB |
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| ID | 4042316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 2202652 |
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| End bp | 2203503 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637980873 |
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| Product | transposase catalytic site ISRme11 |
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| Protein accession | YP_587583 |
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| Protein GI | 94314374 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.361338 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCTCCC ACATCAGTGA ATATTGCCTG CGCACGATGT GTCGGGTACT GGGCGTTCAT
CGTAGCGGTT ACTACGTCTG GCAACGCCAG GCATCCAGCC CACGCCGGCG GGAGGATGAT
CGGCTGCTGG GTCTGATCAA GCATCACTGG TTGGCCAGCG GTGGCGTCTA TGGCTACCGC
AAGATCACGG TAGATCTGCG TGAATCTGGC GAAGCTTGCA GCCGTCACCG TGTGCATCGA
CTGATGAAAG GAGAAGGCCT GCGCGCACAG GTTGGTTACG GCAGCAAGCC ACGCTATCGT
GGCGGTCCGG TCGGCGTGGT GGCGAACGTC TTGAATCGAG AGTTCGCCCC CGATGCGCCG
AACAAGGTCT GGGTCACCGA CATCACGTAC ATCCGAACCT ACGAAGGCTG GCTGTATCTG
GCGGCAGTCA TGGATTTGTA CTCGCGTCAG ATCGTTGGCT GGGCCACGCG ATCAACGATG
ACCAGCGATC TGGTATTGCA GGCCTTGCTA GCCGCAGTCT GGAAACGCAA ACCGAGGGCA
GGTGTTATGG TGCATTCGGA TCAGGGCAGC CAGTTCACCA GCGATGATTG GCAGTCATTC
CTGAAGGCAC ACAACATGGT GCCGAGCATG AGTCGTCGCG GTAATTGTCA CGATAACGCC
GTTGCCGAGA GCTTCTTCAG TGCATTGAAG AAGGAGCGAA TCAAGCGGCG CATCTACCCG
AACAGGGCGA CTGCTGCCAC GGACGTATTC GATTACATTG AGATGTTCTA TAACCCGATT
CGCCGGCACG GTTCCGCCGG CGACCTGTCA CCTGTAGAGT TTGAGCGGCG CTACGCGCTA
AACGGCTCGT GA
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| Protein sequence | MRSHISEYCL RTMCRVLGVH RSGYYVWQRQ ASSPRRREDD RLLGLIKHHW LASGGVYGYR
KITVDLRESG EACSRHRVHR LMKGEGLRAQ VGYGSKPRYR GGPVGVVANV LNREFAPDAP
NKVWVTDITY IRTYEGWLYL AAVMDLYSRQ IVGWATRSTM TSDLVLQALL AAVWKRKPRA
GVMVHSDQGS QFTSDDWQSF LKAHNMVPSM SRRGNCHDNA VAESFFSALK KERIKRRIYP
NRATAATDVF DYIEMFYNPI RRHGSAGDLS PVEFERRYAL NGS
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