Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5388 |
Symbol | apbE |
ID | 4042249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 2113516 |
End bp | 2114505 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637980806 |
Product | ApbE-like lipoprotein |
Protein accession | YP_587516 |
Protein GI | 94314307 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAGGA CGTCTACTAA TCGGTCAGAC ACGGCGCTCG AACTCTGTCG CGTCAGCGGC GCGACCATGG GCACCCGCTA CACGGCGGCA TACTACGCGC CGCCGGGCAT GGATGAAGCG GTGCTGGCGG AACGACTCGC CCTGGCGGTC GGCGCCGTGG ATGCGCAGAT GTCGAACTGG AAGGCAGACT CGGATCTGTC CCGACTGAAC CGTGCTGCGC CGGGCGGTTG GGTGCCGGTC TCCAGGAACC TCGCAACCCT GCTTGCGCGG GCGCTGAAGA TCGGCAGTGA TACGCACAAC GCGTTCAACA TCGGCGTCGG CGATCTGGTC GACCGGTGGG GGTTCGGACC GTCCGGGGCG CAATGCGTTT CGCATCCAGA TCTCGGTGAG GCGGCCGGCG CAAGTCCCCG CCAGCCAGCA GGAGAACTGA TCGAGGTGGA TGAGCGGCTG TGCCGCGTGC GCAAGCTCGG CCCGGTCGTG CTCGATCTGT GTGGCATCGC CAAGGGGTTT GGCGTCGATG AACTCGGGCG TGTGCTGAGC GAGCACGGTA TCGAATCCTG GCTGGTCGGC ATCGACGGCG AGATGCGCGC GCGTGGGAAT AAGCCAGATG GCGGGCCGTG GGCGATCGCC CTCGAGGCCC CGGACTATGA GCGCCGCGCG GCGATGGGCG TGATCGAACT GGCAGATGCC GCCATTGCCA CGTCCGGCGA TTACCGGCGC TGGGCCGATG TCGGCGGCGC GCGCATTTCG CACACGATGG ACCCGCGTAC CGGTGCGCCG CTGGCGGGTG GGATGGCATC GGTCACGGTG GTGGCGAAGA CCTGCGCGGA TGCCGATGCC TATGCGACGG CGCTGATGGT GCTCGGCGCG CAGGCTGGGC CGGACTACGC GCGGCAGCGC GGCCTCGACG TCCTCTTCAT CGTGCGCGAT GGCGAGGCGC TGCGCACGAT CGGAACCGGA TGCTTTGCGG ACGAGGCGCC GTCAAGCTGA
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Protein sequence | MSRTSTNRSD TALELCRVSG ATMGTRYTAA YYAPPGMDEA VLAERLALAV GAVDAQMSNW KADSDLSRLN RAAPGGWVPV SRNLATLLAR ALKIGSDTHN AFNIGVGDLV DRWGFGPSGA QCVSHPDLGE AAGASPRQPA GELIEVDERL CRVRKLGPVV LDLCGIAKGF GVDELGRVLS EHGIESWLVG IDGEMRARGN KPDGGPWAIA LEAPDYERRA AMGVIELADA AIATSGDYRR WADVGGARIS HTMDPRTGAP LAGGMASVTV VAKTCADADA YATALMVLGA QAGPDYARQR GLDVLFIVRD GEALRTIGTG CFADEAPSS
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