Gene Rmet_5372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5372 
Symbol 
ID4042233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2097339 
End bp2097827 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content64% 
IMG OID637980790 
Producthypothetical protein 
Protein accessionYP_587500 
Protein GI94314291 
COG category[S] Function unknown 
COG ID[COG2606] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.000389201 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGGGTA CCAGAACAAC AGTCGCGATA GGCGCGTCGG AGGATGCAAT CATGGCCATG 
GCTAGCACGC TGGCTAGGTG CCTTCACAAC CGGCAGAGCC GGTTCGACAC CGTGGATCGC
CCCTGTAGCG CCGGGGATCG GTTGGCCAAG ACGGTCCTGC TGGAAGATCA GCGCGGCTAC
GTCGCGGCAG TGATTCCCTC GACGCACCAC CTGAAGCTGT CGGAGATCCG TGCGCAGACC
GGCCGCAAGC TGTCGCTTGC CCGCGATTGC GGCGTGCGCG AGGTGTTCAG GGACTGCAGC
CGTGGCGCGA TTCCGCCTGT CGCCATGGCC TATGGCACGC AGACCTGGCT GGACGACAGC
CTGCTCTCGC ATCCGGATGT CTACTTCGAA GCGGGCGACC ACCGGGCATT GGTGCACATG
AGTACCGATC AGTTCGTCGA TCTCATGGCT GACGCGCAAC GCGGGCACTT CTCGCACCGG
GATATGTAA
 
Protein sequence
MRGTRTTVAI GASEDAIMAM ASTLARCLHN RQSRFDTVDR PCSAGDRLAK TVLLEDQRGY 
VAAVIPSTHH LKLSEIRAQT GRKLSLARDC GVREVFRDCS RGAIPPVAMA YGTQTWLDDS
LLSHPDVYFE AGDHRALVHM STDQFVDLMA DAQRGHFSHR DM