Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5372 |
Symbol | |
ID | 4042233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 2097339 |
End bp | 2097827 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637980790 |
Product | hypothetical protein |
Protein accession | YP_587500 |
Protein GI | 94314291 |
COG category | [S] Function unknown |
COG ID | [COG2606] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.000389201 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGGGGTA CCAGAACAAC AGTCGCGATA GGCGCGTCGG AGGATGCAAT CATGGCCATG GCTAGCACGC TGGCTAGGTG CCTTCACAAC CGGCAGAGCC GGTTCGACAC CGTGGATCGC CCCTGTAGCG CCGGGGATCG GTTGGCCAAG ACGGTCCTGC TGGAAGATCA GCGCGGCTAC GTCGCGGCAG TGATTCCCTC GACGCACCAC CTGAAGCTGT CGGAGATCCG TGCGCAGACC GGCCGCAAGC TGTCGCTTGC CCGCGATTGC GGCGTGCGCG AGGTGTTCAG GGACTGCAGC CGTGGCGCGA TTCCGCCTGT CGCCATGGCC TATGGCACGC AGACCTGGCT GGACGACAGC CTGCTCTCGC ATCCGGATGT CTACTTCGAA GCGGGCGACC ACCGGGCATT GGTGCACATG AGTACCGATC AGTTCGTCGA TCTCATGGCT GACGCGCAAC GCGGGCACTT CTCGCACCGG GATATGTAA
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Protein sequence | MRGTRTTVAI GASEDAIMAM ASTLARCLHN RQSRFDTVDR PCSAGDRLAK TVLLEDQRGY VAAVIPSTHH LKLSEIRAQT GRKLSLARDC GVREVFRDCS RGAIPPVAMA YGTQTWLDDS LLSHPDVYFE AGDHRALVHM STDQFVDLMA DAQRGHFSHR DM
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