Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5349 |
Symbol | |
ID | 4042210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 2067930 |
End bp | 2069255 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637980767 |
Product | transcriptional regulator |
Protein accession | YP_587477 |
Protein GI | 291481565 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.982253 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCGCC CCACCACACT CCAGGGACTG TTGTCCTACC TGGAACAGGA AAGCCAGCCG ACGATCGTGC TGGATACCGA CTACCGCATC CTCGCTGCCA ATACGGCCTA CCGCCGCCAG TTTGGCGCGG TGGAACGCCC CTATCTGGGC CAGCCCTGCT ACCGCGTCTC GCACGGCTAT GATGTGCCGT GCGATCAGGC CGGCGAACAC TGTCCGATGC GCAAGGCGTT CGAGACCCGT GGGCCGGATC GCGTCCTTCA CATCCATCAC ACCCCGCGTG GCCCCGAGCA TGTGAACGTG GAACTGCGCC CGATCCTCGA CGACAACCAC CAGGTGGTGG CTTACGTCGA GCGCCTGAAC ACCGTGCGAA GCGCATCGGC GCGGCCGAGC GCGGAAGGGC TGGTGGGACG CTCGGAGGCC TTCAATCACG CGCTGGAGGC CGTGCAGCGC GTAGCACCGT CGTCGTTACC GGTGCTGCTG CTCGGTGAAT CGGGCACTGG CAAGGAGATG TTCGCGCGCG CCGTGCACGA GGCCAGCGAC CGCGCCAGCG GGCCGTTCGT CGTGGTCGAT TGCTCGGGCC TGACGGAGAC CCTGTTCGAG AGTGAGCTGT TCGGCTACGA GAAGGGCGCG TTCACCGGCG CGCAGGCGCG TAAGCCGGGG CTGGTCGAGA CGGCCGAGGG CGGCACGCTA TTCCTCGACG AAATGGGCGA TGTGCCGCTG GCCATGCAGG TCAAGCTGCT GCGCCTGATC GAGTCGGGTA CTTACCGGCG CGTGGGTGGC GTCGAGACGC TGCAGTCGAA CTTCCGGTTG GTTGCCGCCA CGCACAAGCC GCTCGATCAG ATGGTGGCGC AGGGGCTGTT TCGCCAGGAT CTGTACTTCC GGATCGCGGC ATTCCCGATC CATCTGCCGT CGCTGCGAGA CCGCCTGGAC GATATCGCGC TGCTGGCCGA GTCGATTCTG GCGCGCGGCA ATCGGACCAA GGACCCGCTG CGGCTGAGTT CTGAGGCGCT CGCGCGCATG CGCGCTCACC ACTGGCCGGG CAATATTCGC GAACTGCGCA ACGTGCTGGA GCGCGCCCGT CTCTATGCCG ACGACGGTGT GATCCGCGTG AAGGATCTGC CGCCGGGAAT GGGCGAGGCC CGTGTGTCTT CGGTCCGCTT CGTGCCGCCG TCCGCGTATC GCACGCAGGC GCCACGGCAG GATGACGATG AGGCGCTGCG TTTCCACGCA AGCCACTTCA CGGGCACGCG CCGCGCGCTT GCCCAATCGC TCGGCATGAG CGAACGCACC CTCTATCGCC GGCTCAAGGC GCTGGGCATC GAATAG
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Protein sequence | MDRPTTLQGL LSYLEQESQP TIVLDTDYRI LAANTAYRRQ FGAVERPYLG QPCYRVSHGY DVPCDQAGEH CPMRKAFETR GPDRVLHIHH TPRGPEHVNV ELRPILDDNH QVVAYVERLN TVRSASARPS AEGLVGRSEA FNHALEAVQR VAPSSLPVLL LGESGTGKEM FARAVHEASD RASGPFVVVD CSGLTETLFE SELFGYEKGA FTGAQARKPG LVETAEGGTL FLDEMGDVPL AMQVKLLRLI ESGTYRRVGG VETLQSNFRL VAATHKPLDQ MVAQGLFRQD LYFRIAAFPI HLPSLRDRLD DIALLAESIL ARGNRTKDPL RLSSEALARM RAHHWPGNIR ELRNVLERAR LYADDGVIRV KDLPPGMGEA RVSSVRFVPP SAYRTQAPRQ DDDEALRFHA SHFTGTRRAL AQSLGMSERT LYRRLKALGI E
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