Gene Rmet_5349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5349 
Symbol 
ID4042210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2067930 
End bp2069255 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content67% 
IMG OID637980767 
Producttranscriptional regulator 
Protein accessionYP_587477 
Protein GI291481565 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.982253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGCC CCACCACACT CCAGGGACTG TTGTCCTACC TGGAACAGGA AAGCCAGCCG 
ACGATCGTGC TGGATACCGA CTACCGCATC CTCGCTGCCA ATACGGCCTA CCGCCGCCAG
TTTGGCGCGG TGGAACGCCC CTATCTGGGC CAGCCCTGCT ACCGCGTCTC GCACGGCTAT
GATGTGCCGT GCGATCAGGC CGGCGAACAC TGTCCGATGC GCAAGGCGTT CGAGACCCGT
GGGCCGGATC GCGTCCTTCA CATCCATCAC ACCCCGCGTG GCCCCGAGCA TGTGAACGTG
GAACTGCGCC CGATCCTCGA CGACAACCAC CAGGTGGTGG CTTACGTCGA GCGCCTGAAC
ACCGTGCGAA GCGCATCGGC GCGGCCGAGC GCGGAAGGGC TGGTGGGACG CTCGGAGGCC
TTCAATCACG CGCTGGAGGC CGTGCAGCGC GTAGCACCGT CGTCGTTACC GGTGCTGCTG
CTCGGTGAAT CGGGCACTGG CAAGGAGATG TTCGCGCGCG CCGTGCACGA GGCCAGCGAC
CGCGCCAGCG GGCCGTTCGT CGTGGTCGAT TGCTCGGGCC TGACGGAGAC CCTGTTCGAG
AGTGAGCTGT TCGGCTACGA GAAGGGCGCG TTCACCGGCG CGCAGGCGCG TAAGCCGGGG
CTGGTCGAGA CGGCCGAGGG CGGCACGCTA TTCCTCGACG AAATGGGCGA TGTGCCGCTG
GCCATGCAGG TCAAGCTGCT GCGCCTGATC GAGTCGGGTA CTTACCGGCG CGTGGGTGGC
GTCGAGACGC TGCAGTCGAA CTTCCGGTTG GTTGCCGCCA CGCACAAGCC GCTCGATCAG
ATGGTGGCGC AGGGGCTGTT TCGCCAGGAT CTGTACTTCC GGATCGCGGC ATTCCCGATC
CATCTGCCGT CGCTGCGAGA CCGCCTGGAC GATATCGCGC TGCTGGCCGA GTCGATTCTG
GCGCGCGGCA ATCGGACCAA GGACCCGCTG CGGCTGAGTT CTGAGGCGCT CGCGCGCATG
CGCGCTCACC ACTGGCCGGG CAATATTCGC GAACTGCGCA ACGTGCTGGA GCGCGCCCGT
CTCTATGCCG ACGACGGTGT GATCCGCGTG AAGGATCTGC CGCCGGGAAT GGGCGAGGCC
CGTGTGTCTT CGGTCCGCTT CGTGCCGCCG TCCGCGTATC GCACGCAGGC GCCACGGCAG
GATGACGATG AGGCGCTGCG TTTCCACGCA AGCCACTTCA CGGGCACGCG CCGCGCGCTT
GCCCAATCGC TCGGCATGAG CGAACGCACC CTCTATCGCC GGCTCAAGGC GCTGGGCATC
GAATAG
 
Protein sequence
MDRPTTLQGL LSYLEQESQP TIVLDTDYRI LAANTAYRRQ FGAVERPYLG QPCYRVSHGY 
DVPCDQAGEH CPMRKAFETR GPDRVLHIHH TPRGPEHVNV ELRPILDDNH QVVAYVERLN
TVRSASARPS AEGLVGRSEA FNHALEAVQR VAPSSLPVLL LGESGTGKEM FARAVHEASD
RASGPFVVVD CSGLTETLFE SELFGYEKGA FTGAQARKPG LVETAEGGTL FLDEMGDVPL
AMQVKLLRLI ESGTYRRVGG VETLQSNFRL VAATHKPLDQ MVAQGLFRQD LYFRIAAFPI
HLPSLRDRLD DIALLAESIL ARGNRTKDPL RLSSEALARM RAHHWPGNIR ELRNVLERAR
LYADDGVIRV KDLPPGMGEA RVSSVRFVPP SAYRTQAPRQ DDDEALRFHA SHFTGTRRAL
AQSLGMSERT LYRRLKALGI E