Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5340 |
Symbol | hlyB |
ID | 4042201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 2050600 |
End bp | 2052366 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637980758 |
Product | hemolysin activator translocator |
Protein accession | YP_587468 |
Protein GI | 94314259 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2831] Hemolysin activation/secretion protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAATCA AGTCGATGGC GATGACTCGC CCACTTCATG CGAGCCTGCT GCTGCTCGGC CTGTCCACGT GCGCGGAGGC GCAGCCGACT GGCCCGGGCC GGAGCCCGGC CACCACCGCC GCCGATCAAC AACAACTCAC CCGCCAGCAA CAGGAAGCCC GCGAGCGCGC CCAGGCCATC GAGGCTCCCG GCGTGCGCGC GCAGGAGATC ACGCCGCTCG TCTATCCGAC GCTGCCGACC GAGACGCCAT GTTTCCGCAT CGACCGCTTC GTGCTCGAAG TCCCGGCCGA TCTGCCCGAT AGCGTCCAGG TACACGGTGC TTCTACGCTG CCGATGGACC CGTTTGCTTT TGCCCGAGCA TGGCTCGATC ACTATCAGGG TGCGTGTGTC GGCAGGCAGG GCCTGGATAT GCTGACCATG GGTGTGTCTC AGGCCATTCT GAGTCGGGGC TATGTCACCA CGCGCGTGTT ACTGCCGCAG CAGGACCTCA GCACCGGGAC CTTGCGATTG GCGCTGATCC CCGGCGTGAT CGGCGAGTTG CGTTTTGCGG AACCGGATAC GCGTGGCACA TGGAAGTCCG CGTTTCCGGC ACGTTCGGGC GATCTCCTGA ATCTGCGCGA CCTGGAGCAG GGGCTGGAGC AAATGAAGCG TGTGGCCAGT CAGGATGCCG AGATGCAGAT CGTGCCGACT GCCGTGCCGG GCGTGAGCGA TGTGGTCATC GCGGTCAAGC GGGCGAAGGC GTGGACCGTG GTGGCGTCGA TTGACAACTC GGGCACGGAG GCAACGGGAA AATGGCTCGG CAATCTGAGT CTGGGCATCG ATAACCCACT GGGTCTCAAC GATCTGTTCA ACGTCGGCTA TATGCAGGAC GTTGAGCTTG GCAATCGGAA GCACGGCACG CGCGGCTGGA ACGGCTTCTA CTCGGTGCCG TGGGGTTACT GGACGGGCAC GCTGTCCGCG TACTCGAACA CGTACTACCA GCAGATTGCG GGCGTCAACC AGACCTTTGT CTCGAGCGGG AATTCGCAGA CGGTGGACAT GAAGCTGCAG CGCGTGATTC GCCGCAGCCA GAGCGACGTA CTGGGTCTGC AGTTCCGGCT CTCGCGCCGC TTTGGCGAGA GCTTCATCGA GGATACGGCA ATCCCCCAGC AGCGGCGCAA CAACACGTTT GTGGAGGCCG GCTTCACCGA TCGCCATTAC TTCGGCTCGG CGCAGTTCGA TGGCAGCCTC GTGTATCGCC AGGGCATCGG CGGATTCGGC TCGCAGGCCG ACACGCTGGC TGTGAACGGC GGGCCGACAT GGCGCTACAG CATGGTCGTG GCCGATGCCA ATCTGTCGGC GCCCTTCCGG CTCGGCGACC AGATGTTGCG TTACGTGACG ACCTTCCGTG GCCAGTACAC CGGCGATCGC CTGTATGCGC TGGACATGAT GACCATCGGC AGCCGCTATA CGGTGCGCGG CTTCGACGGT GAGATGCTGT TGGCCGGCGA TAGTGGCTTC TACTGGCGCA ACGAACTGCA GGCACCCGTC GCCAACACCG GGCAGGCGCT GTATGCGGGG CTGGACTACG GACGTGTGTT CGGGCCGTCG ACGGTCGGGC TGGTTGGTAC GCAATTGATC GGCGCGGTGC TGGGCCTGCG CGGTGGCTTT GGTTCGAAGT TCGGGCGGCT GTCCTATGAC TTCTTTGTCG GCCTGCCCGT GTACAAGCCC GCCGCCTTTC ATACGTCTGG CGTCACCGGC GGGATGCAGG TGGCGTACCA GTACTGA
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Protein sequence | MRIKSMAMTR PLHASLLLLG LSTCAEAQPT GPGRSPATTA ADQQQLTRQQ QEARERAQAI EAPGVRAQEI TPLVYPTLPT ETPCFRIDRF VLEVPADLPD SVQVHGASTL PMDPFAFARA WLDHYQGACV GRQGLDMLTM GVSQAILSRG YVTTRVLLPQ QDLSTGTLRL ALIPGVIGEL RFAEPDTRGT WKSAFPARSG DLLNLRDLEQ GLEQMKRVAS QDAEMQIVPT AVPGVSDVVI AVKRAKAWTV VASIDNSGTE ATGKWLGNLS LGIDNPLGLN DLFNVGYMQD VELGNRKHGT RGWNGFYSVP WGYWTGTLSA YSNTYYQQIA GVNQTFVSSG NSQTVDMKLQ RVIRRSQSDV LGLQFRLSRR FGESFIEDTA IPQQRRNNTF VEAGFTDRHY FGSAQFDGSL VYRQGIGGFG SQADTLAVNG GPTWRYSMVV ADANLSAPFR LGDQMLRYVT TFRGQYTGDR LYALDMMTIG SRYTVRGFDG EMLLAGDSGF YWRNELQAPV ANTGQALYAG LDYGRVFGPS TVGLVGTQLI GAVLGLRGGF GSKFGRLSYD FFVGLPVYKP AAFHTSGVTG GMQVAYQY
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