Gene Rmet_5327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5327 
SymbolzneS 
ID4042188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2036008 
End bp2037450 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content66% 
IMG OID637980745 
Productperiplasmic sensor signal transduction histidine kinase 
Protein accessionYP_587455 
Protein GI94314246 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.446982 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGTG CCGAAGGAAG GCTGAAACAC GCCGGGCCAA AGCACTCGGT CCAGCAACGG 
CTATCCCTCT GGGTATCGCT GGCGATCCTC GCGGTGGCGC TCATCGGCGG CATCTTTTCG
TTTGCCTCCG CGTTCCGCGA AGCCAACATC ATGCAGGACG ACCTGCTGCG GCAGGTGTCG
ATGCTGTTCG ACGCGCAGCA TCTGCCCGCG CCCCATCTGG CGGACGCTGG CAGACTGCCG
CACAGCGACG AGGAAGCCCG CGTCATTGTG CAGACCCTGT CACCGGGCGG TGACAGCGCC
CGGCAGATAC TGGCATTGCC CGCCAGCGCG CCCGATGGTC TCGGCACCTT CGAAGTCGAC
CACGAGTCCT ACCGCGTGCT GATCCGGACG CTGCCGACCG GCCAACGCAT TGCCGTTGCC
CAGGAAACCG GCATGCGCGA CGAGATCGCG CGCAACAGCG CACAAGTTAC TGTGTTGCCG
TTTCTGGTGC TCGTACCGGT GCTGCTGCTG ATCGTGGCCT ATCTGGTCCG CCAGATGTTC
CGCCCCATCT CCACCCTTTC CACTGACATC GACCGGCGCG GCGAGCACGA ACTGTATCCA
TTGCCGGAAG ACGAGCTTCC CGCCGAAGTC CGTCCTTTCG TGGTGGCCAT CAACCGGCTG
CTGGCCCGTA TCGCGCAGGC CATGGAGATG CAGCGCCGCT TCGTCGCCGA CGCGGCGCAC
GAACTGCGCT CGCCGATGAC CGCGCTATCG CTGCAGGCCG AACGGCTCGA ACGCACCGAG
ATGCCCGAGG CGGCGCGCAC CCGGCTGGCC ACCCTGCGGC GCGGCATCGA ACGCAGCCGC
GCCCTGCTGG AACAGTTGCT GAGTCTCGCA CGTGCCCAAT CGGCAACCGC CGCGCCAGCG
CCAGCGGAAA GCATCTCCGT GCGGCACGCC TTCCGGCGCG TGCTGGAAGA CCTGATGCCA
CTGGCCGATT CGCGTCACAT CGACATTGGC GCGGTTGGCG ACACCGACGC GCAGGTGCCA
ATTCAGGAGG TGGAGCTGAT CACGCTGCTC AAGAACCTCG TGGACAACGC CATCCGCTAT
ACGCCCAAAC ACGGCCGCGT CGATCTGTCG GTGGAGACTT CCCCCAATGC GGTGGCGATG
ATCGTGACCG ATTCCGGACC CGGCATCAGC ACGGAGGAAC GAAGCAGGAT CTTTGATCCG
TTCTACCGGA TTCCGGGCAA CGACGCGCCC GGCTCCGGCC TTGGTCTCTC CATCGTCCGG
GTCATTGCCG AGCGGGTGGG CGCCACGGTC GAGATCGACT ACGCCGACGC GGCCGCGCGC
CACGGCACGC GCGTGACGGT GCGCGTGCCG TGTGGTGACA ACTGTGGTGG CAACTACGGT
ACCAACGAGA GCGGCGTCCG TCGGCAGCAC GCGGCTGCCA CCACGGATCA GCCGTTACCC
TGA
 
Protein sequence
MAGAEGRLKH AGPKHSVQQR LSLWVSLAIL AVALIGGIFS FASAFREANI MQDDLLRQVS 
MLFDAQHLPA PHLADAGRLP HSDEEARVIV QTLSPGGDSA RQILALPASA PDGLGTFEVD
HESYRVLIRT LPTGQRIAVA QETGMRDEIA RNSAQVTVLP FLVLVPVLLL IVAYLVRQMF
RPISTLSTDI DRRGEHELYP LPEDELPAEV RPFVVAINRL LARIAQAMEM QRRFVADAAH
ELRSPMTALS LQAERLERTE MPEAARTRLA TLRRGIERSR ALLEQLLSLA RAQSATAAPA
PAESISVRHA FRRVLEDLMP LADSRHIDIG AVGDTDAQVP IQEVELITLL KNLVDNAIRY
TPKHGRVDLS VETSPNAVAM IVTDSGPGIS TEERSRIFDP FYRIPGNDAP GSGLGLSIVR
VIAERVGATV EIDYADAAAR HGTRVTVRVP CGDNCGGNYG TNESGVRRQH AAATTDQPLP