Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5279 |
Symbol | |
ID | 4042140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 1979051 |
End bp | 1979977 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637980697 |
Product | LysR family transcriptional regulator |
Protein accession | YP_587407 |
Protein GI | 94314198 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.328918 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.21823 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTGC GGCAGTTGCG CTACTTCGTG CATGTGGTGG AGCTTGGCAG CATGGGGCAG GCGGCCCAGC GACTGGGCGT CGTCACGTCC GCGTTGAGCC AGCAGATCAG CCGCCTCGAG AGCGAGCTAT CCACGCGACT GCTGCAGCGC ACGTCGAGCG GCGTGGTGCC GACCGACGCG GGTCTGGCCT TCTGGCGTCA GGCGCAACTG GCGCTGCGCC ACGCGGACGA TGCCGCGCGC GCGGCGCGGA CGGCGCGGCT GTCGGGCCAC GTCAGCGTGG GCATGGCACC GAGCACGCTG GCGGTGCTGG GGCCTCCGTT CATGGTCGCG ATGCGCGAGC GTTATCCCGA TATCCGTCTT CATCTGGTCG AAAGCCTCTC CGGCAACCTG GCTTCGATGA TTGGCGCGCG CCAGCTTGAC CTGGCCGTGC TGTTCCAGCT CGAAGCGGGT CAGCGCTGGA GCACCACGCC ATTGCTCGAA GAGCGGCTTT TCCTGATCGC GCGCCCCGAT CAGCCCGGCT TGCCAGCGGC AAATGCGGTG CGGCTCGAGG ACATCGGCGA CATCCCGCTG ATTCTGCCCA GCAGCGCGCA CGGTCTGCGT GCCGTGCTGA ACGCGGCCGC GGCCCGTCAC CAGCGTGCGC TGAACGTGGT GGCCGAAATC GACGGGCTGG CCGTACTGAT GGACGCCGTG CGCGCCGGCA TTGGCGCGAC GATTCAGCCT GGCGCCGCCG TGGCGCGCCA TCTGGGCGAC CCGCTGGCGC TGATCGAGAT CGCCGATGCC AGCGTCAGGC GTCCGAACCT GCTGGTCAGC CTGTCGGACG ACGAACTGTC GCCGGCCGGC CTGGCAGCGC GAGGCGTGCT CGAATCAGTG GCCCGCCAAC TGGTCACGGC CGAACGCTGG CCCGGCGCCA CCCTTCACAA ATCCTGA
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Protein sequence | MELRQLRYFV HVVELGSMGQ AAQRLGVVTS ALSQQISRLE SELSTRLLQR TSSGVVPTDA GLAFWRQAQL ALRHADDAAR AARTARLSGH VSVGMAPSTL AVLGPPFMVA MRERYPDIRL HLVESLSGNL ASMIGARQLD LAVLFQLEAG QRWSTTPLLE ERLFLIARPD QPGLPAANAV RLEDIGDIPL ILPSSAHGLR AVLNAAAARH QRALNVVAEI DGLAVLMDAV RAGIGATIQP GAAVARHLGD PLALIEIADA SVRRPNLLVS LSDDELSPAG LAARGVLESV ARQLVTAERW PGATLHKS
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