Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5159 |
Symbol | |
ID | 4042020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 1858484 |
End bp | 1859440 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637980577 |
Product | LysR family transcriptional regulator |
Protein accession | YP_587287 |
Protein GI | 94314078 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.169813 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTGA GCCAACTTCA GGACTTCATT GCCGTGGCCG AGACCGGCAG CATTCGGGCC GGCGCCAAGG CCCGCAATGT CTCGGGTCCG GCCATCACCA AGAGCATTCG CCTGCTCGAG GAAGAACTGC ACGTGCCGTT GCTGACACGC ACTACGCGCG GCGTGGTGCT GTCGCGCTAT GGCGAGGCAT TTTTGCGGCG CGCGCAGCTC ATCGCCAGCG AGGCGCGCAA GGCCACCGAC GAGATGTCGC AGATGCTGGG CACGCGCAAT GGCGTGGTCC GTATCGGCGC CACGGGCGGC CCGGCGCACC TGCTGCTGCC GGCCGTGCTC AAGCGCTTTC GATCGCAACA CCCGGACGTC CAGGTCTGCA TCGACAGCGG TGTCTATCCC GCCCACCTTT CCGATCTGCG CGCCGGTGTC ATGGACATGG CAGTCAGCCC AATTCCGGAC GAGGGCATCG AGCGCGAGTT TGTCTCCGAG CCGCTGTACG ACAATGACTC GGTAGTGGTG GCGCACAAGG ACCATCCACT GCGCAACGCC CGCAGGCTGC GCGAACTGGT GGGATCGGAG TGGGTGCTGA CGGGCCAGCG GATGCACGGC CCCGGCGCCG CGATTCTGGA CGCCTTCCGT GCACTCGATC TGCCGTTGCC ACGCGTGGCC GTGCGTTGCG ACACCATCGG CATGATCCAG ACACTGCTTG AAGACCGGTC GCTGCTCTGC CTGCTGCCGC GCCAGTTGGT GCCCGGCCAA CTGGCCAGCG CCAATCTGGT GGCGCTGCCC ATCGAGGATC CGTTGCCCAG CCATGCGGTA AGCCTGATCT ATCGGGCCGA TTCTCCGATG ACGCCCGTGG CGGAGCAGTT CGCCACGCTG TTGCGACGAG AAGTGCACTA TCTCGGTAAG CAGCCGGACA GCCCACTCCG CAGACAGGTA CCCCGCGCCA CGGAAATGGC CGGCTAG
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Protein sequence | MRLSQLQDFI AVAETGSIRA GAKARNVSGP AITKSIRLLE EELHVPLLTR TTRGVVLSRY GEAFLRRAQL IASEARKATD EMSQMLGTRN GVVRIGATGG PAHLLLPAVL KRFRSQHPDV QVCIDSGVYP AHLSDLRAGV MDMAVSPIPD EGIEREFVSE PLYDNDSVVV AHKDHPLRNA RRLRELVGSE WVLTGQRMHG PGAAILDAFR ALDLPLPRVA VRCDTIGMIQ TLLEDRSLLC LLPRQLVPGQ LASANLVALP IEDPLPSHAV SLIYRADSPM TPVAEQFATL LRREVHYLGK QPDSPLRRQV PRATEMAG
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