| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5148 |
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| Symbol | caiB |
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| ID | 4042009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1846112 |
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| End bp | 1847335 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637980566 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_587276 |
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| Protein GI | 94314067 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.392977 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.592286 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGG CGCTTGGCCA TATCAAGGTG CTGGACCTGT CCCGTGTGCT GGCCGGACCC
TGGGCCACCC AGAATCTGGC GGACATGGGG GCCGAAGTCA TCAAGGTGGA GCGACCTGGC
GCCGGCGACG ACACGCGCGG CTGGGGGCCG CCGTTCCTGA AGGACCCGCA AGGCAACGAG
ACCGATGATT CGTCGTACTT CCTCAGCGCA AACCGGGGCA AGAAATCGAT CACGATCGAC
CTTGCATCGC CAAAGGGCCA GGACATCATC CGGGCGCTGG CCCGCGAATG CGATGTTGTG
GTCGAGAACT ACAAGGTGGG CACGCTGGCT CGCTATGGCC TGTCCTACGA AGACCTGCGC
AAGCTCAACC CGCGTCTGGT GTACTGCTCG ATCACGGGAT TCGGTCAGAC CGGGCCCTAT
GCGGCATTGC CGGGCTACGA CTTCGTTTTC CAGGGTATGG GCGGTCTGAT GAGCATCACC
GGGATGCCGG ATGGCGAGCC CGGCGCCGGC CCGGTGAAAT CCGGCATCGC CATCACAGAT
CTGCTCACCG GCATGTACGC CACATCGGCC ATCCTTGCCG CGCTTGAGCA CCGGAACGTC
AGCGGAGAGG GCCAATACAT CGATATCTCG TTGCTCGATT GCGTGGTCAC CATCAATTCG
TACCAGGCCA TCAACTACTT TCTGTCCGGC AAGGTCCCCC AGCGGATGGG CAATGCGCAC
TCGAACATGG TGCCGTACCA GGTATTCCGC TGCAAAGAGG GTGACGTCAT CGTGGCGGTC
GGCAACGACA CCCAGTACGC GGCGTTCTGC GGCGTCATCG GGCGTCCCGA TCTGGCGGAA
GATGCCCGAT TTACCACTGC AGCACAGCGC AACCGAAATC GGGAGACGCT GATTCCCCAG
GTTGCCGAGG CGATGCTGGC CAGAACCATG ACGGAATGGG TGACGCTGAT GGAAGCGGCG
AACGTGCCTT GCGGACCGAT CTACAACATG AAACAGGTGT TCGAAGACCC GCAGGTCAGG
CATCGGGACA TGCAGCTCGT TCTGGAGCAC AGCAGCGGTT CGAAAGCCCC ATCGCTTGCG
AATCCGATTC GTTTCTCCGA TACGCCGATT CGCTACCAAC GCTCCGCGCC AACCCTGGGT
GAACACACCG ACAGGGTTCT GCAGGACATG CTTGCCTTTT CAGCCGAGAC CATCGACGCC
TTGAGGGAGC AGGGCGTGAT CTGA
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| Protein sequence | MSKALGHIKV LDLSRVLAGP WATQNLADMG AEVIKVERPG AGDDTRGWGP PFLKDPQGNE
TDDSSYFLSA NRGKKSITID LASPKGQDII RALARECDVV VENYKVGTLA RYGLSYEDLR
KLNPRLVYCS ITGFGQTGPY AALPGYDFVF QGMGGLMSIT GMPDGEPGAG PVKSGIAITD
LLTGMYATSA ILAALEHRNV SGEGQYIDIS LLDCVVTINS YQAINYFLSG KVPQRMGNAH
SNMVPYQVFR CKEGDVIVAV GNDTQYAAFC GVIGRPDLAE DARFTTAAQR NRNRETLIPQ
VAEAMLARTM TEWVTLMEAA NVPCGPIYNM KQVFEDPQVR HRDMQLVLEH SSGSKAPSLA
NPIRFSDTPI RYQRSAPTLG EHTDRVLQDM LAFSAETIDA LREQGVI
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