Gene Rmet_5130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5130 
Symbol 
ID4041991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1827623 
End bp1828294 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content64% 
IMG OID637980548 
ProductOmpR/winged helix family two component transcriptional regulator 
Protein accessionYP_587258 
Protein GI94314049 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.76336 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCC TGCTGATCGA GGACGAAGCC ACACTGGCGC GCCAGCTTGC CGATACGCTG 
TCTCAGGCAG GATATGTGGT GGATCACGCG TCAGATGGCA TCGACGCCGA GCATCTCGGT
ACCGAGAATC CCTATGATGC GGTCATTCTC GACCTGGGCC TGCCCAAGCT CGATGGCCTG
ACCGTGCTCA AGCGTTGGCG CCAGGCCGGC AACGGCGTGC CGGTGCTGAT TCTGACCGCG
CGCGACAGCT GGGTGGAGAA GGTGGAAGGC ATCGACGCGG GCGCGGATGA CTATCTCACC
AAGCCGTTCC GTGCCGAGGA ACTGCTGGCC CGTATTCGGG CGCTGATCCG CCGCTCCACC
GGGCATACCT CGCCCGTTCT CGTCTGCGGC CCCGTCACGC TGGCGCCCGC CACTGGTCAG
GTCAGTGTGG ACGGATCGCC CATCGTCCTT ACCGCCCACG AGTACAAGGT GCTCGATTAC
CTGATGCACC ACCAGGGTGT GATCGTCAGC AAGACCACGC TGACCGAGCA TATCTACGCG
CAGGACCATG ACCGCGACAG CAATACCATC GAGGTATTCG TCGGTCGCCT GCGACGCAAG
CTCGGTGTCG ACGTCATCGA AACGGTGCGT GGCCTCGGAT ACCGGCTGCG CCCGCCGGAA
CACGGCGCAT GA
 
Protein sequence
MRILLIEDEA TLARQLADTL SQAGYVVDHA SDGIDAEHLG TENPYDAVIL DLGLPKLDGL 
TVLKRWRQAG NGVPVLILTA RDSWVEKVEG IDAGADDYLT KPFRAEELLA RIRALIRRST
GHTSPVLVCG PVTLAPATGQ VSVDGSPIVL TAHEYKVLDY LMHHQGVIVS KTTLTEHIYA
QDHDRDSNTI EVFVGRLRRK LGVDVIETVR GLGYRLRPPE HGA