| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5118 |
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| Symbol | |
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| ID | 4041979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1811909 |
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| End bp | 1812976 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637980536 |
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| Product | outer membrane porin |
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| Protein accession | YP_587246 |
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| Protein GI | 94314037 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGTTC GTCACGGCGT TGCGATGGCA ACCCTGGGGA TGATTGCAGG CACCGCGTCC
GCGCAATCCA GCGTCACGCT TTATGGCGTC GCCGACGTTG GTATCGAGTA CCTCAGCAAC
GTGCCTTCCG CCAACGGCGG CGCCAGCCAG GTACGGATGG CATCCGGCAA CATGTCCACA
TCCCGCTGGG GCATTCGTGG TGTCGAGGAT CTCGGCGGCG GCCTGAAGGC GATCTTCGAT
CTCGAAAGCG GTATTTCGCT CGATACCGGC GCGCAAAACA ACCGGACCCG GCTCTTCGAT
CGGACGTCTA TCGTAGGTCT GAGCAGCAAG TACGGAACCG TCACGTTGGG CCGCCAGACC
ACCCCGCTGT ATGACACCGC GATCCAACTC GACCCGATGG GCTTTGCGCC GCGGTACTCG
CTCTACAAGA GTGACGACGT GCTGGCCGGC CGCGCGGACA ACTCAATCAA GTACCGTGGC
ACGTTCAACG GACTAACCGC CAGCGGCTTG TACAGTTTCA GCCGAACCGG CGGCGGAGAG
GTCCCCGGCA ACTACACCCT CGACCGCAAT CTCGGTATCT CGTTGTCCTA TGAGGTGAGT
TCCTTCGCGA TCGGCGCGGT ATATGACGAG TACCAGGGCT CCACGCTTGC TACCGCCGAA
CGCAAGGACC GGCGCATGCT GGTCGGCGCG AGCTACGCCT TCGGCCCGGC AAAGGCCTTC
ATCGGCTATC GCTGGTACAA CGGCAACGTC GGCGCCATGC CGACCGACCG CTCCGATCTG
TACTGGGCGG GTCTGCGTTA CAGCGTGACG CCCGCGCTGA AGCTGACCGG CGCGGCGTAC
TACACGAACA TGCGCAACGC CGGGGCCGAC CCGATCATGT TCGTCGCCTC GGCGGACTAT
GCATTCTCCA AGCGCACGGA CGTGTACATG AATGCCGGCT ACGCGCTGAA CCGCGGCAAC
TCCCAGCTCG GCATGAACGG ATTCAACACG CCGAGCGGCA GCCCGACCAA CGTCGTTCCC
GGCAAGGACC AGACTGGCCT GGTGGTCGGC GTGCGCCACA AGTTCTGA
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| Protein sequence | MNVRHGVAMA TLGMIAGTAS AQSSVTLYGV ADVGIEYLSN VPSANGGASQ VRMASGNMST
SRWGIRGVED LGGGLKAIFD LESGISLDTG AQNNRTRLFD RTSIVGLSSK YGTVTLGRQT
TPLYDTAIQL DPMGFAPRYS LYKSDDVLAG RADNSIKYRG TFNGLTASGL YSFSRTGGGE
VPGNYTLDRN LGISLSYEVS SFAIGAVYDE YQGSTLATAE RKDRRMLVGA SYAFGPAKAF
IGYRWYNGNV GAMPTDRSDL YWAGLRYSVT PALKLTGAAY YTNMRNAGAD PIMFVASADY
AFSKRTDVYM NAGYALNRGN SQLGMNGFNT PSGSPTNVVP GKDQTGLVVG VRHKF
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