| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5109 |
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| Symbol | |
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| ID | 4041970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1801187 |
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| End bp | 1802371 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637980527 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_587237 |
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| Protein GI | 94314028 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00125099 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.9776 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCATC GCGCATTGGA AGGCATTCGC GTGCTGGACC TGTCGCGCAT CCTGGCTGGG
CCGTGGTGTA CGCAGAACCT CGCCGATCTG GGCGCCGAAG TTGTCAAGGT CGAACATCCG
CAGCGTGGCG ATGACACGCG CGGTTGGGGC CCCCCGTATC TGGATGCCGC GGATGGCAGC
GACGCGCGCC TTTCCGCGTA CTTCATCAGC TGCAATCGCG GCAAGCAGTC GGTGTGCATC
GACTATGGCC AGCCTGAAGG TGTCGCGCAA TTGCTGGAGC TGGCCCGCCA CGCCGACGTG
CTGGTGGAGA ACTACAAGGT GGGGACGCTC AAACGCTACG GGCTCGACTA TGCGTCGCTC
AAGGCGATCA ATCCGCGTCT GATCTATCTG TCGATCACGG GGTTCGGTCA GGACGGCCCG
ATGGCCGACA AGCCCGGCTA TGACTACGTG TTCCAGGGTA TGGGCGGACT GATGAGCTAC
ACCGGCCAGC CGGATGGTAG CCCCGGCGCT GGGCCGTTGC GCACGGGCGT GGCAGTGGTC
GATGTCAGCA CGGGCATGTA TGCGACGAGT GCCGTGCTGG CGGCGCTGTT CCAGCGTCAG
CAGACCGGTG AAGGCCAGCA TCTCGATATC GCACTGCTCG ACGTGGCCGT CGCACTGAAT
GCGAATCAGG GCGCCAACTA CCTGGTATCG GGAAAGAACC CGCAACGCAC GGGCAACGCG
CATCCAAACT GCGCGCCGTA TGAGGTCTTC CGATGCGCCG ATGGTTATCT GATTCTGGCG
ATCGGCAACG ACACGCAGTT CGCACGCTTC TGTGATGTGG CGGGGCGTCC GGATCTCGCG
CAAGACCCGC GCTACGTCAC GAACTCAGGC CGCATCGAAC ATCTCACCGA ACTGCGCAAG
GTACTGACGG CGTTGTTCCC GACGCGCTCG CGTGCCGACT GGACGTCGGC GTTCGACGCC
GCCGGTGTGC CCTGGGGCCC GATTCATACG ATGGAAGAGG TCTTCGCGCA TCCGCAGGTC
CAGCATCGGC AATTGCGTCA GGTGGCCACG CATCCGGTGA CGGGCGAGGT GCCAATGGTG
CGCAATCCGA TGCTGCCGGC CAATCCGCAG CCGCTCAAGC CACCGCCGCT GCTCGGCGAA
CACACGGGCG TCACAGCAGT GGCCGCCATC GCTGCCGCGC GATAG
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| Protein sequence | MLHRALEGIR VLDLSRILAG PWCTQNLADL GAEVVKVEHP QRGDDTRGWG PPYLDAADGS
DARLSAYFIS CNRGKQSVCI DYGQPEGVAQ LLELARHADV LVENYKVGTL KRYGLDYASL
KAINPRLIYL SITGFGQDGP MADKPGYDYV FQGMGGLMSY TGQPDGSPGA GPLRTGVAVV
DVSTGMYATS AVLAALFQRQ QTGEGQHLDI ALLDVAVALN ANQGANYLVS GKNPQRTGNA
HPNCAPYEVF RCADGYLILA IGNDTQFARF CDVAGRPDLA QDPRYVTNSG RIEHLTELRK
VLTALFPTRS RADWTSAFDA AGVPWGPIHT MEEVFAHPQV QHRQLRQVAT HPVTGEVPMV
RNPMLPANPQ PLKPPPLLGE HTGVTAVAAI AAAR
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