| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5108 |
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| Symbol | |
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| ID | 4041969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1800156 |
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| End bp | 1801136 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637980526 |
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| Product | extra-cytoplasmic solute receptor |
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| Protein accession | YP_587236 |
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| Protein GI | 94314027 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000000351886 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.964391 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAATA TGAAGCCAAC CTTCCTGGCA CTGGCAGCGC TGGCCTCTGT GGGCCCGGCA
TGCCTTGCCC ACGCCGCCGA CTGGCCGGAC AAGCCGATCA AGCTCGTGGT GCCCTACGCG
GCCGGTGGTA CTACCGACAT CATCGCGCGC GTGGTCGGCA CGCGGATTGG CGCGGTGCTG
AAGCAGCCTG TTGTGGTCGA GAACCGTCCC GGCGCCGGTG GCGCGGTAGG CAGTGCCTAC
GCGGCCAAGC AGCCGGCCGA TGGTTATACG CTCGTGATGG AAGTGGAAAG CTCCCACGCG
GTTAACCCGA ACGTCTATCA GAAGACGGCG TACGATCCGG TCAAGGATTT CGATCCGATC
AGCAATCTGG CGGACGTGCC CAACGTGCTG GTGGTCAATC CGTCATTCCC CGCTCAGGAC
ATGTCGGCCT TCATCAAGCT GCTGAAGGCG TCGCCGGGCA AGTATTCATT TGGGTCGTCG
GGCAACGGTG GCCTGAGTCA TATGAATGGC GAACTGTTCA TGAGCGTCAC GGGCACGAAG
ATGCTGCACG TGCCGTACAA GGGCCTGGGG CCGGCGCTGA ACGATGCGAT GGCTGGACAG
ATCCAGGTTG TGTTCGACAA TATCCCGTCG TCGTCCGGCC TGATCCAGGG CGGCAAGCTG
CGGCCCCTGG CCGTGGCGGC CAAGCATCGA CTCAAGATGC TGCCCAATGT GCCGACCTAC
GCGGAAGCCG GGCTGCCCGC GATGAACAAT CCGTCGTGGT TTGGCCTCGG CGCGCCGGCT
GGCACGCCGC CGGCGATCCT CGACAAGATT AATGCGGCCG TCAAGCAGGT GCTGGCCGAG
CCGGAGGTGG TCGACGCCAT CGAGAAGCAG GGCGCGCTGC CTGCCTATAC CACGCGCAAG
GCCTTCGCCG ATCTGATACG GGAGCAGAAT CAGCACTGGA AGAAGGTAGT CGAGGATATC
CATTTCGCAA AGCTGCAGTA A
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| Protein sequence | MMNMKPTFLA LAALASVGPA CLAHAADWPD KPIKLVVPYA AGGTTDIIAR VVGTRIGAVL
KQPVVVENRP GAGGAVGSAY AAKQPADGYT LVMEVESSHA VNPNVYQKTA YDPVKDFDPI
SNLADVPNVL VVNPSFPAQD MSAFIKLLKA SPGKYSFGSS GNGGLSHMNG ELFMSVTGTK
MLHVPYKGLG PALNDAMAGQ IQVVFDNIPS SSGLIQGGKL RPLAVAAKHR LKMLPNVPTY
AEAGLPAMNN PSWFGLGAPA GTPPAILDKI NAAVKQVLAE PEVVDAIEKQ GALPAYTTRK
AFADLIREQN QHWKKVVEDI HFAKLQ
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