Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5100 |
Symbol | |
ID | 4041961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 1792012 |
End bp | 1792692 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637980518 |
Product | GntR family transcriptional regulator |
Protein accession | YP_587228 |
Protein GI | 94314019 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.2531 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.563225 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGGAA GATCCACGTC TGCGCTAGGC GCGGCGACAC GCGCCGAAGC GGCAACGGAA GAACTCAGGC GGCGAATCCT GGAAGGCGAG CTAGTGGAGG GCTTTCAGCT CAAGCAGGAT CTTCTCGCGG AAGAATTCGG CATCAGCCGC ATCCCGGTGC GGGAAGCACT GGTCCAGCTA GAGAACGAAG GGCTGGTGAA GATCGTCCCC CACAAGGGGG CGATTGTTGC GGAGCTGTCG ACGAAGGACA TCGAAGAGCT GTTCTCGTTG CGCGCGCTGC TCGAATCCCA TCTGCTCCGA CATTCGATTC CCCGCCTCAC AAAGGATGAC TTCGACCGAC TCGATGAAAT CCTGAAGCGC TACGCCATCG AGCTCGCCGA GGGGCATTCG CACCGGTGGG GCGAACTCAA CACCGAGCTG CACGACATCC TGCTCGGGCG TGCCAACCGG CCCAGGTCCC TGGACCTGGT GCAGTCGCTA TTGCGGCAGA CCGATCGCTA CACACGGGTG CAGCTCTCCA TCAGCGATGC CGCCGTGCAG CGCGCCAAGG CGGAACACGA GGAACTCGTC CGCCTTTGCC GGCTGGGCGA ATCGAGGGAG GCGTGCGCGC TGCTCAAGCG GCATATCGAA CATGCCGGCG AGGAGTTGAT TCTGTTTCTG CGGGAGCGCC GGAGGCCGTA A
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Protein sequence | MNGRSTSALG AATRAEAATE ELRRRILEGE LVEGFQLKQD LLAEEFGISR IPVREALVQL ENEGLVKIVP HKGAIVAELS TKDIEELFSL RALLESHLLR HSIPRLTKDD FDRLDEILKR YAIELAEGHS HRWGELNTEL HDILLGRANR PRSLDLVQSL LRQTDRYTRV QLSISDAAVQ RAKAEHEELV RLCRLGESRE ACALLKRHIE HAGEELILFL RERRRP
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