| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5091 |
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| Symbol | dppD |
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| ID | 4041952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1781022 |
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| End bp | 1782068 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637980509 |
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| Product | oligopeptide/dipeptide ABC transporter ATP-binding protein |
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| Protein accession | YP_587219 |
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| Protein GI | 94314010 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0785342 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.616274 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCCA CCCGCAAGGC ACTCCCCGCC GGCACACCAC TGCTGGAAGT ACAGGACCTG
CACGTGCGCT TCGACACCCT GACCGGCCCC GCGCGATCGG TCAACGGTGT CTCCTACACG
GTGCGCGCCG GCCAGACACT GGGTGTGGTC GGTGAATCCG GCTGCGGCAA GAGTGTGACC
GCGCTCTCCA TCATGCGGCT GCTGTCCGCG CCACCCGCGC ATGTGACAGG CGCCGTCCTG
CTCGACGGGA CCGATCTGCT CACGCTCGGC GAGCGCGAGA TGCGCCGCAT CCGTGGCAAC
CGCATCTCCA TGATCTTCCA GGAGCCGATG ACCTCGCTCA ACCCGGTCTT GACCATCGGC
CGCCAGATCG CGGAAACCGT ACGCCTGCAC CAAGGGGCGA GCCATGCCGA AGCGCTTGCC
CGCGCGATCG ACATGCTGCG CCTCGTGCAG ATCCCCGAGC CCGAGCGGCG CGCGAACGAG
TATCCGCATC AGCTCTCTGG CGGCATGCGC CAGCGCGTGA TGATCGCGCT CGCGCTGGCC
TGCAACCCCG AGGTGCTGAT CGCCGACGAG CCCACCACCG CGCTGGACGT GACCATCCAG
GCGCAGATCC TCGACCTGAT CCGACGCCTG CAGCAGGAGC TGGGCACCGG CGTGGTGATG
ATCACGCACG ACCTCGGCGT GGTGGCGGAG AGCTGTCATC GCGTGGTGGT GATGTACGCC
GGGCGCAAAG TCGAAGAAGC GAACGTGGCC GATCTGTTCG ACCGTCCGCT GCATCCCTAC
ACACGTGCCC TGATGGCGTC CATGCCGTCG ATGAACACCG GCAGCAGCCG CCTGACCGAG
ATCCCCGGGT TGGTGCCGTC GCCCCAGCAA CCACAGCGCG GCTGCGCCTT CGCGCCCCGC
TGTGCCCAGG CGCAGGCCCG CTGTCACACG GAGATGCCTC GGCTTTCGGC ACAGGGCGCC
GACCACTTCG TGGCCTGCTT CGCCGTCGAG ACACGTCAAT CCGATGGCGT CGCACCAGTC
GACAGTACCC CGGAGACCCT TGCATGA
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| Protein sequence | MTSTRKALPA GTPLLEVQDL HVRFDTLTGP ARSVNGVSYT VRAGQTLGVV GESGCGKSVT
ALSIMRLLSA PPAHVTGAVL LDGTDLLTLG EREMRRIRGN RISMIFQEPM TSLNPVLTIG
RQIAETVRLH QGASHAEALA RAIDMLRLVQ IPEPERRANE YPHQLSGGMR QRVMIALALA
CNPEVLIADE PTTALDVTIQ AQILDLIRRL QQELGTGVVM ITHDLGVVAE SCHRVVVMYA
GRKVEEANVA DLFDRPLHPY TRALMASMPS MNTGSSRLTE IPGLVPSPQQ PQRGCAFAPR
CAQAQARCHT EMPRLSAQGA DHFVACFAVE TRQSDGVAPV DSTPETLA
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