| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5060 |
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| Symbol | atoA1 |
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| ID | 4041922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1750168 |
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| End bp | 1750869 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637980481 |
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| Product | acetyl-CoA:acetoacetyl-CoA transferase subunit beta |
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| Protein accession | YP_587191 |
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| Protein GI | 94313982 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00134827 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCATGACA CCCTGCCCCG CCTCGGCACG CTGCCGCGAC TGAGCCGCGC CCAGATGGCG
CGCATCGTCG CCCATGACAT TCCCGATGGC AGCGTCGTCA ATCTCGGCAT CGGGATGCCC
ACGCTCGTAT CCGACCAGTT GCCCGACGAC CGCGAGATCG TGCTGCACAG CGAGAACGGC
ATTCTCGGCA TGGGTCCGGT TATCCGCGAA GGCGAGACCG ACCCGGACCT GATCAACGCC
AGCAAGGAGC CGATCAGCCT GATCGCCGGC GCGTCGATCT CGGACCACGC GGTGTCGTTC
ACCATGATGC GCGGCGGGCA TATCGATATC ACTGTGCTGG GCGGATTCCA GGTCGCGGCC
AATGGCGATC TGGCCAACTG GTCAACCGGC GAGCCCGATG CGATTCCTGC GGTGGGCGGC
GCGATGGACC TGGTAGTGGG CGCGGCCAGG CTGTTCGTGA TGATGGAACA CGTGACGCGC
GACGGACAAC CGAAGATCGT CGAACGCTGC AGCTATCCGT TGACGGGCAT CGGCGTAGTT
GACCGCATTT ATACCGACCT GGCCGTGATC GACGTTCGGC CCGGCAAGCC ATTGCTGGTG
ACCGGCCTGG TCGAGGGCGT GTCGTTCGAA ACGGTGCAGG CGCTATCGGC CGCACCACTC
ACGCTGGCGG CCGACTGCCG CGTGCTAAGG GCAGGACGCT GA
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| Protein sequence | MHDTLPRLGT LPRLSRAQMA RIVAHDIPDG SVVNLGIGMP TLVSDQLPDD REIVLHSENG
ILGMGPVIRE GETDPDLINA SKEPISLIAG ASISDHAVSF TMMRGGHIDI TVLGGFQVAA
NGDLANWSTG EPDAIPAVGG AMDLVVGAAR LFVMMEHVTR DGQPKIVERC SYPLTGIGVV
DRIYTDLAVI DVRPGKPLLV TGLVEGVSFE TVQALSAAPL TLAADCRVLR AGR
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