Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5047 |
Symbol | hutH |
ID | 4041909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 1734019 |
End bp | 1735575 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637980468 |
Product | histidine ammonia-lyase |
Protein accession | YP_587178 |
Protein GI | 94313969 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2986] Histidine ammonia-lyase |
TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.114235 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTACC AAGAAAATCA GCCAGTCTTC GCCCTGCATC TGCAACCCGG TGAGCTCACG CTCGCGCAAC TGCGTGCCGT GCATCAGCAG CCCGTCAAGA TCACGCTCGA CGAGCGCGCC TTCCCCGCCA TCGACCGCAG CGTGGCGTGT GTCGAAAACA TCATCGCCGA GGGCCGCACG GCCTACGGCA TCAACACCGG ATTCGGCCTG CTGGCACAGA CCCGCATTGC CCGCGAGGAC CTGGAGAACC TGCAGCGTTC GCTGGTGCTT TCCCACGCGG CAGGTGTGGG CGAGCCGATC GACGACGCGC TGGTGCGCCT GATCATGGTG CTCAAGATCA ACAGCCTGGC GCGTGGCCTG TCTGGCATCC GCCGCAAGGT GATCAGCGCG CTGATCGCGC TGGTGAACGC CGAGGTGTAC CCGTGCATTC CGCTGAAGGG CTCCGTTGGC GCGTCGGGCG ATCTGGCGCC GCTGGCCCAT ATGTCGTTGC TGCTGCTGGG CGAAGGCCGG GCACGCCATC GCGGCGAATG GCTGTCGGCT CGCGAAGCGC TGGCCATTGC CGATTTGCAG CCGCTGACGC TCGCCGCCAA GGAAGGGCTG GCGCTGCTGA ATGGCACGCA GGTTTCCACC GCGTATGCGC TGCAGGGTTT GTTCCAGGCG GAAGACCTGT ACGCGGCGGC CAGCGTTTGC GGCGCGCTGA CCGTCGAGGC GACGCTCGGC TCGCGCGCTC CGTTCGATCC GCGCATTCAC GCCGCCCGTG GCCAGCGCGG CCAGATCGAC GCGGCGGCGG TCTATCGTCA CCTGCTGGGG GAGACCAGCC AGCTCGGCCA ATCGCACGCG CATTGCGACA AGGTGCAGGA CCCGTACTCG CTGCGCTGCC AGCCCCAGGT CATGGGCGCC TGCCTGACGC AGATCCGCAA TGCGGCGGAT GTGCTGGGCG TCGAAGCGAA CTCGGTTTCC GACAATCCGC TGGTATTCGC GCAGGAAGGC GATATCATCT CGGGCGGCAA TTTCCACGCG GAACCGGTGG CAATGGCCGC GGACAACCTC GCGCTGGCGC TGGCCGAGAT CGGCTCGCTC TCCGAGCGGC GTGTGTCGCT GATGATGGAC CAGCACCTGT CGCAGTTGCC GCCGTTCCTG GTCGCCAATG GCGGCGTGAA CTCCGGCTTC ATGATCGCGC AGGTCACGGC CGCCGCGCTG GCATCGGACA ACAAAGCGCT TGCGCATCCG GCCAGTGTCG ATAGCCTGCC TACCTCGGCG AACCAGGAAG ACCATGTGTC GATGGCGCCC AACGCTGGCA AGCGTCTCTG GGAGATGGCC AGCAACGTCA AGGGCATCGT GGCGATCGAA TGGCTGGCGG CCTGCCAGGG CATGGACTTC CGTGAAGGCG GCAAGACCAC CGAAGCGCTG GAGCGCGCGC GCGGCCTGCT GCGTCAGTCG GTGCCGTTCT ACGACAAGGA CCGGTACTTC GCGCCGGATA TCGAAGACGC CAGCGTGCTG ATCGCCGAGC GTCACCTGAC GGCCCTGCTG CCTGCAGGCA TCCTGCCGAG CGTCTGA
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Protein sequence | MSYQENQPVF ALHLQPGELT LAQLRAVHQQ PVKITLDERA FPAIDRSVAC VENIIAEGRT AYGINTGFGL LAQTRIARED LENLQRSLVL SHAAGVGEPI DDALVRLIMV LKINSLARGL SGIRRKVISA LIALVNAEVY PCIPLKGSVG ASGDLAPLAH MSLLLLGEGR ARHRGEWLSA REALAIADLQ PLTLAAKEGL ALLNGTQVST AYALQGLFQA EDLYAAASVC GALTVEATLG SRAPFDPRIH AARGQRGQID AAAVYRHLLG ETSQLGQSHA HCDKVQDPYS LRCQPQVMGA CLTQIRNAAD VLGVEANSVS DNPLVFAQEG DIISGGNFHA EPVAMAADNL ALALAEIGSL SERRVSLMMD QHLSQLPPFL VANGGVNSGF MIAQVTAAAL ASDNKALAHP ASVDSLPTSA NQEDHVSMAP NAGKRLWEMA SNVKGIVAIE WLAACQGMDF REGGKTTEAL ERARGLLRQS VPFYDKDRYF APDIEDASVL IAERHLTALL PAGILPSV
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