Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5041 |
Symbol | |
ID | 4041903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 1727941 |
End bp | 1729143 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637980462 |
Product | putative signaling protein |
Protein accession | YP_587172 |
Protein GI | 94313963 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.883935 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAAG CAGACGTCGA AATGAGTTTC GTTGTTGATC CGGTTCGGGT CGAGTTCTCG GATCCGGGGC TCGAGCGGGA GTTTCAGCAA CACCATCTGC GGACCACGCG GGCGTCGTTG CGGGTCACCC TGGTGTTCTG TTCGCTGTTT TATCTGGCCT TTTCCCTGAC CGATCTGGCC GCGCTGGGCT ATGGGACGTC GTTCCTCGTG CTGCTGCTGG GGCGAATCAC CGTTGCGCTG ACTGCCTGCG GCGGTCTGTA TCTGATTCGC CGGAAAACTG AGTCGGTGCT GGCCCACCGG GCCGTGGCCA GCGCGGCGGA GGTCGTCGGG ATGGCGATCT TCATGCTGGT CGTCTGGTTC CGTCCCGGCG AGTTGCCCTG GCACGCGATG TCGCTCTGCA TCATGCTGAT CGTCATCTAC GTCTTCATCC CAAATCGGCT CATCACCGCG ATTGGCATCG CCCTTGGCGC GACGGCGGCC TTCATCGCGC TGGCCGTGAT AAGGGGGGAG TCGAGGTTCT CCGACGAAGT CACGATGGCG ATGCTTCTGC TGCTGACCAA CAGCTTCGGC ATCATCGCGG CGCGCCGCTA TCACCGGCTG TGGCGCGACG AGTATCGGGC GCTCAGTACA TTGAAGGCGC TATCCATCCG CGACCATCTC ACAGCCTGCT TCAACCGGCG GCATCTGCAC ACGACGCTGC TGCCGCAGGT GCTGGAGCGG GCTCGCGCCG AGCGTCGCTG GCTGACGCTG ATGGTTTGCG ATATCGACCA TTTCAAGCGC GTCAACGACA ACCACGGCCA CCAGGGTGGC GATGCCGTGC TGATGCACGT TGCCATGCTG CTGCAGGACC GCATCCACGA GCCACGGGAC AGCGTCGTTC GCTACGGCGG GGAGGAGTTC CTGCTCGTCA TGCCGCAGAT GGACTTCGAG TCGGCCGCCA GTCTGGCCGA GGACATGCGC GCCGCGGTGG CGGGCAGTGA GGTGCCCGGC CCCGATGGCA AGAGCATGCG CGCCACGGTC AGCATCGGGG TGCTCTCCGT CGATTTCTCG GCCAGCGATA CCGAGGTCAC CGAAAGCGCG TTGATTGCCG CTGCCGATAT GTTGCTCTAT GAAGCCAAAC GGGCCGGACG GAACAGCATC CGGACCCGGC TTTGGGCGGA TATGGTGTCC AGCCACGCTG TCTTGAGTAT GCGAACGGCC TGA
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Protein sequence | MSEADVEMSF VVDPVRVEFS DPGLEREFQQ HHLRTTRASL RVTLVFCSLF YLAFSLTDLA ALGYGTSFLV LLLGRITVAL TACGGLYLIR RKTESVLAHR AVASAAEVVG MAIFMLVVWF RPGELPWHAM SLCIMLIVIY VFIPNRLITA IGIALGATAA FIALAVIRGE SRFSDEVTMA MLLLLTNSFG IIAARRYHRL WRDEYRALST LKALSIRDHL TACFNRRHLH TTLLPQVLER ARAERRWLTL MVCDIDHFKR VNDNHGHQGG DAVLMHVAML LQDRIHEPRD SVVRYGGEEF LLVMPQMDFE SAASLAEDMR AAVAGSEVPG PDGKSMRATV SIGVLSVDFS ASDTEVTESA LIAAADMLLY EAKRAGRNSI RTRLWADMVS SHAVLSMRTA
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