Gene Rmet_4977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4977 
SymbolmmfS 
ID4041839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1653953 
End bp1655284 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content60% 
IMG OID637980398 
Productperiplasmic sensor signal transduction histidine kinase 
Protein accessionYP_587108 
Protein GI94313899 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.870976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.849775 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACGAAT CAGTTCAGCT CAAGCTGTCC TTCACCTTGT CGCTGGCCAT CCTCGTGGTG 
GCCGTTGTGG CGGGCGTATT CTCGTTCCTG TCCGCCTTCG ATGAAGCGCA CGAACTACAG
GACGATGTAC TGCGCCAGGT GGCGCAGCTC ATGGATCGCC AGCGCTTGTT GCCTGCCGTG
CCAACCACCG ATATCCGTCT CAAGGATGTC GATGAAGAGT CGCGCGTGAT CGTCCAGCGC
TTGGGTGAGG TCAGTCCCTC TACGGTAGGC GTGGATGCAG GAGGCGTGCT CCCGCTCCCG
GCGACCTTGG CGGATGGATT GCACACGCTG GAAGTTGGTG GCGAGACGTT TCGCGTGCTG
GTCAAGACCA CGGCGAGCGG CGAACGCATT GCTGTGGCTC AGGAGTCCGG TTTCCGCAAT
GAAATTGCCC GCGACGGGGC ACTGCGCACG GTGATGCCTT TCTTGATTCT CGTGCCGGTG
CTGCTGTTGA TCGTTGCTGA CCTGGTGCGC AAGATGTTCC AGCCCATCGC GGCGCTGTCC
AAGGAAATAG ACCAGCGGGC AGAGCAGGAA CTGCATCCCG TCGAAGACCG CCACCTTCCG
GTCGAGGTAC GTCCGTTTGT CGTGGCGATC AATCGCCTGC TCGCTCGTGT CAGCCAGTCG
ATGGAATCTC AGCGCCGCTT TGTGGCGGAT GCCGCGCACG AGCTACGTTC GCCGCTGACA
GCCATGTCGC TGCAAGCAGA ACGGCTCGCG GAAGCGGAAA TGTCCAGCGT GGCGCGCGAA
CGGCTGACGG TTTTGCGCCA AGGGATCGAG CGCGGCCGCA GCCTGCTCGA TCAACTCTTG
ACCTTGGCCA AGGCACAGTC GGCCACCGAC CTGCCGAAGT CGCCTGTATC TGTCCAGAGC
ATCTACCGCC GCGTGCTGGA AGACCTCATG CCGCTGGCCG AGGCCAAGCA CATCGACATC
GGTGTCGAAG GCGCGCTGGA CGCCGAAGTG TGGGCAAGCG AGCTGGACAT GATCGCTGTG
GTCAAGAACC TAGTCGATAA CGCCATCCGC TACACGCCAG AGGGAGGGCG TGTTGATCTT
TCTGTGGGTG TTTCGGAAGG GAAGGTCGTA CTACGTATTC AGGACAGTGG GCCTGGCATT
CCGTTGGCTG AACGGGATCG AGTGTTTGAT CCCTTCTACC GCACGCTGGG GAGCGAGCAG
ATCGGCTCGG GTCTGGGACT ATCCATTGTC CAGACGATTG CCAATCGCAT CGGTGCTGAA
ATCCGCCTCG ACTTCTCAGA TCAAGAGAAG CAAACTGGCT TAAATGTTGC CGTTATCGCT
CCCATGCGGT AG
 
Protein sequence
MNESVQLKLS FTLSLAILVV AVVAGVFSFL SAFDEAHELQ DDVLRQVAQL MDRQRLLPAV 
PTTDIRLKDV DEESRVIVQR LGEVSPSTVG VDAGGVLPLP ATLADGLHTL EVGGETFRVL
VKTTASGERI AVAQESGFRN EIARDGALRT VMPFLILVPV LLLIVADLVR KMFQPIAALS
KEIDQRAEQE LHPVEDRHLP VEVRPFVVAI NRLLARVSQS MESQRRFVAD AAHELRSPLT
AMSLQAERLA EAEMSSVARE RLTVLRQGIE RGRSLLDQLL TLAKAQSATD LPKSPVSVQS
IYRRVLEDLM PLAEAKHIDI GVEGALDAEV WASELDMIAV VKNLVDNAIR YTPEGGRVDL
SVGVSEGKVV LRIQDSGPGI PLAERDRVFD PFYRTLGSEQ IGSGLGLSIV QTIANRIGAE
IRLDFSDQEK QTGLNVAVIA PMR