| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4950 |
|---|
| Symbol | |
|---|
| ID | 4041812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | + |
|---|
| Start bp | 1615313 |
|---|
| End bp | 1616338 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637980371 |
|---|
| Product | putative LacI family transcriptional regulator |
|---|
| Protein accession | YP_587081 |
|---|
| Protein GI | 94313872 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.213435 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.991862 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAAA AGCAGATCAG CATCCGTGAC GTCGCTGCCC TGGCCGGTGT ATCGGTCGGT
AGCGCGTCGC GCGTGATCAA CGGCGCCGCC AACGTCACGC CGGACGTGCG CGAGCGCGTC
GATCGCGCCA TCGCGGCACT GCGGTATCGC CCCAACCACG CGGCGCAATC GCTGCGTTCG
CGCACGAGCA AGACCATCGG ATGCATGTTT TCGGACGTGG CCAACCCGCT CTACGCACGC
GCCTTCCGCG CGCTCGAGGA ACATTTCCGG CGTGAGGGAT ACATGCTGCT GCTGGCGAAC
GGCCTCAACG ATGCCGAACG CGAGATCGAC ATCATCCAGA CGTTCCAGTT ACGCGGCATG
GACGGCGTTA TCCTGGCGCC GGGCAACGAG CGACATCCGG GCGTGCTCGA TGCGGTGCGC
CGGCTGTCGA TGCCGGCCGT AATCTACGAC CGCGACTTGG CAGTGGATGC CGATGCCGTG
CTGTTCGACC ACGTGGCCGG CGTGAAGGCC GCGATCCATC ATCTGGTGGA ACTCGGCCAT
ACGCGCATCG CGCTGGCGCT ATGGCAGGTC AAGAGCCGCC CGGTGCGCCG GCGGATCGAA
GGCTACAAGG CCGCCTTCAA GGCCGCCGGC CTCCCGGTAC CGGACCTGAT CCTGCAGGAA
CCCACACCCA CCAGCTCCGC TTTCGACGAC GTCACGCGGC TGCTGCAACT GCCTGACCCG
CCCACGGCAT TCCTTGCCCA GGGCACCCAC ACGCTCACCA GCACGCTGCG CGCGATCGCC
AAGCAAGGCC TGCGCGTGCC GGAGGACGTC TCGGTGATCG GTATCGGCGA TACCGACTTC
GCGCAGACCT ACGATCCGCC GCTGACCGTG CTGCGCACAC CAACGGACGA GGTAGCCGCA
CACGCCGTGG AGATGCTGCT TTCACGCCTG GCCGCCAAGG GGGACGCCAG CCTGTCGCCA
CGCAAGGCGC TGATCCAGTT CGACCTGATC CTGCGCGAGT CGTGCGCGCC CGTTGCCCGG
CACTGA
|
|---|
| Protein sequence | MAEKQISIRD VAALAGVSVG SASRVINGAA NVTPDVRERV DRAIAALRYR PNHAAQSLRS
RTSKTIGCMF SDVANPLYAR AFRALEEHFR REGYMLLLAN GLNDAEREID IIQTFQLRGM
DGVILAPGNE RHPGVLDAVR RLSMPAVIYD RDLAVDADAV LFDHVAGVKA AIHHLVELGH
TRIALALWQV KSRPVRRRIE GYKAAFKAAG LPVPDLILQE PTPTSSAFDD VTRLLQLPDP
PTAFLAQGTH TLTSTLRAIA KQGLRVPEDV SVIGIGDTDF AQTYDPPLTV LRTPTDEVAA
HAVEMLLSRL AAKGDASLSP RKALIQFDLI LRESCAPVAR H
|
|---|
| |