| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4824 |
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| Symbol | |
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| ID | 4041686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1476331 |
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| End bp | 1477311 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637980245 |
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| Product | putative ornithine cyclodeaminase |
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| Protein accession | YP_586955 |
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| Protein GI | 94313746 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0411643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.294021 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCTA ATCAACGATC CGCAGAGCTG CTTCTGCTCG ACAAGCACGC CGTGGAAGCG
GCGCTGCTGC CCGACGACGT GCTGGCCGCC GTGCGCGAGG CATTCGTGCT GCACAGCCAG
CGTGAGGGAC GCGTCTTCCC TGTGGTGCGG GAAAAGCTGG CGACAGGCGG GGTGTTCGGC
ATCAAGGCCG GCGACGTGGG CAGCCAGAAC CTGCTTGGCT TCAAGGCTGC CGGGTTCTGG
CCTGGCAACC GCCAGTTGGG CGGAGACACC CACCAGGCCA CGATCGTCCT GATCGACCCC
GCCACGGGGC GGCCCCTCTG CATCGTTGAC GGCAACGCCA TCACCACGGC ACGTACCGGC
GCCGCCGGCG GCATCGGCCT GCAACAACTG GCCCGGCCCG ACAGCACGCG CGTCTGCGTC
TTTGGCACCG GCGTCCAGGC CCGCATTCAG CTCGAATTTG CCTTGCTCCT GATGCCCACC
TTGCAAACGG TGCGCTATGT TTCGAGCAGT GGCCAGCGCC ACGCGGCGTT TGAAGCAGCC
TTCCAGGACC GGTGTGACAT CCAACTGGCG ACGGACCGCG ATGACGCCGT GGCCAACAGC
GACGTGGTAA TCACCGCCAC CCCGGGCGGC GGCCCCTTGT TCGACGCCCA GGCCGTGCGG
CCGGGCACGC ACCTGACCTG TGTCGGCGCC GATACCACCG GCAAGCGCGA ACTGCCTGCG
GGCGTGCTGG AACGCGCGCG CATCGTCGTG GACGACAGCG AACAGGCGCG CCGCATCGGC
GAATGCCAAT GGGCCCCCGA TCTCCCATGC ATCGAGATTG GCGACCTGCT GACCGGCAAG
GCCACGATCA CGCGCGAGCC CGCCGATATC ACCGTATTCG ACATGACCGG ACTGGCCCTG
CAGGACCTGA CGGTCGCCCG CTTCCTGGAC CAACGCGCGC GGGCCGACGG CACCGGCACA
CGCCTGGCCT GGCCCTGGTA A
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| Protein sequence | MSANQRSAEL LLLDKHAVEA ALLPDDVLAA VREAFVLHSQ REGRVFPVVR EKLATGGVFG
IKAGDVGSQN LLGFKAAGFW PGNRQLGGDT HQATIVLIDP ATGRPLCIVD GNAITTARTG
AAGGIGLQQL ARPDSTRVCV FGTGVQARIQ LEFALLLMPT LQTVRYVSSS GQRHAAFEAA
FQDRCDIQLA TDRDDAVANS DVVITATPGG GPLFDAQAVR PGTHLTCVGA DTTGKRELPA
GVLERARIVV DDSEQARRIG ECQWAPDLPC IEIGDLLTGK ATITREPADI TVFDMTGLAL
QDLTVARFLD QRARADGTGT RLAWPW
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