| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4822 |
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| Symbol | |
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| ID | 4041684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1472967 |
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| End bp | 1475171 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637980243 |
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| Product | hypothetical protein |
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| Protein accession | YP_586953 |
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| Protein GI | 94313744 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1944] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00702] uncharacterized domain
[TIGR03549] conserved hypothetical protein TIGR03549 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000227003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.373155 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATTA AGGTCGACTT TCTCGATAAG CTGCGTCTTG AAGCTAAGTT CGATGATTTC
ACGGTAATAG CTGACCAGCC TATCCGTTAT AAAGGCGATG GTTCCGCACC TGGTCCGTTC
GATTATTTTC TCGCCTCGTC GGCTTTGTGT GCGGCCTACT TTGTCAAAGT GTACTGTGTG
GCCCGCAATA TTCCCACCGA TAATATCCGC CTGTCGCAGA ATAATATTGT TGATCCGGAA
AACAGATATC AGCAGATTTT CAAGATCCAG GTCGAATTGC CAGCAGATAT TTCTGCCAAG
GACCGCCAGG GTATCTTGCG ATCCATCGAT CGCTGCACGG TAAAAAAGGT GGTGCAAACC
GGACCCGAGT TTGTGATCGA AGAGGTGGAG AACCTGGACG CCGATGCTCA ATCGTTGCTG
ACGTTGAAGC CGGCGTCTGG CGCCAGCACC TATATTTCAG GCAAGGATCT CCCATTGGAG
CAAACTATCG CCAATATGTC AGGCATTTTG GCGGGCCTGG GGATGAAGAT TGAAATCGCG
TCATGGCGCA ATATCGTTCC CAATGTCTGG TCGCTACATA TCCGTGACGC GCACTCGTCA
ATGTGTTTCA CCAACGGCAA GGGAGCAACC AAGGAAAGCG CATTGGCGTC GGCGTTGGGT
GAATTTATCG AACGCCTGAA TTGCAACCAT TTTTATGCCG GTACATTCTG GGGCGAAGAT
CTCGCCAATG CGGCGTTTGT ACACTACCCG AACGAGCGCT GGTTCAAGCC GGGACGCAAA
GATGCGCTAC CCGTTGAAAT TCTCGATGAA TACTGCCTGC CTATATACAA TCCCGATGGC
GAGTTACGCG GCTCGCATCT GTACGAGACC AACTCGGGGA ATGTGCAGCG TGGTATCTGT
TCGCTGCCCT TCGTACGCCA GTCAGACGGC GAAGTGGTGT ATTTCCCCTC CAATCTGGTC
GAAAATCTTT ACGCCAGCAA TGGCATGAGT GCAGGCAATA CACTGGCCGA AGCACAGGTG
CAATGCTTGT CGGAGATTTT CGAGCGGGCG GTAAAGCGCG AGATTCTGGA GGGCGAAATG
GCACTGCCTG ATGTGCCCCA GGAAGTGCTG GCGAAATATC CTGGCATTAT GGCTGGCATT
CAGGTGCTGG AAGAGCAAGG TTTTCCGATA TTGGTGAAGG ATGCATCGTT GGGTGGAATC
TATCCGGTGA TGTGCGTCAC CTTGATGAAC CCACGCACTG GCGGTGTCTT TGCTTCGTTC
GGTGCGCACC CAAGCTTCGA GGTGGCGCTG GAACGGAGTT TGACGGAATT GCTGCAGGGT
CGTAGTTTTG AAGGCCTGAA CGATCTACCA CGGCCCAGCT TTGTCAGTAA TGCCGTGACT
GAGCCAAACA ATTTTGTCGA GCACTTCATT GACTCCAGCG GCGTGGTGTC GTGGCGCTTT
TTCAGCGCCA AATCGGATTT CGATTTTGTC GAGTGGGATT TTTCTGGCCA GGGCAAGAAT
TCCAATACCG AGGAAGCAGC AACCTTGCTC AGCATCCTGG AAGGCATGGG CAAGGAAGTG
TATATGGCGG TGTATGACCA GCTCGGCTCC GTTGCTTGCC GGATATTGGT TCCTGGCTAT
TCGGAAGTTT ATCCTGTCGA GGATCTGATC TGGGATAACA CAAACAAGGC ACTGTCGTTC
CGCGCAGACA TTTTGAACTT GCATCGCCTG GACGACGAAA GCCTGGAGGC CCTGCTTGAG
CGCCTGGATA ACAGTGAGCT CGATGAATAC GCCGACATCG CCACGCTGAT CGGCATAGAG
TTTGACGAGA ATACCGATTG GGGCCAGCTG ACAGTGTTGG AGTTGAAGCT GCTCATTCAT
CTCGCGTTGC AGCAATTTGA GGCGGCGCAC GAACTGGTGG GCGCCTTCTT GCAATACAAC
GACAACACGC TCGAGCGCGG ACTGTTTTAC CAAGCCTTGG ATGTGGTGCT GGAGGTGCTG
TTGGATGACG ACCTTGACCT GGAAGACTAC AAGGTCAACT TCCGTCGGAT GTATGGCAAT
GCGCGGATGG ACGCGGTGCT CGGTTCAGTT GACGGCAGCG TGCGTTTCTT TGGTTTGACG
CCAACCAGCA TGAAATTGGA GGGGCTCGAC AGGCACCACC GCCTGATTGA CAGCTACAAG
AAATTGCACG CCGCGCGGGC AAATGCAGCG GCTGCAGCCA GTTAA
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| Protein sequence | MEIKVDFLDK LRLEAKFDDF TVIADQPIRY KGDGSAPGPF DYFLASSALC AAYFVKVYCV
ARNIPTDNIR LSQNNIVDPE NRYQQIFKIQ VELPADISAK DRQGILRSID RCTVKKVVQT
GPEFVIEEVE NLDADAQSLL TLKPASGAST YISGKDLPLE QTIANMSGIL AGLGMKIEIA
SWRNIVPNVW SLHIRDAHSS MCFTNGKGAT KESALASALG EFIERLNCNH FYAGTFWGED
LANAAFVHYP NERWFKPGRK DALPVEILDE YCLPIYNPDG ELRGSHLYET NSGNVQRGIC
SLPFVRQSDG EVVYFPSNLV ENLYASNGMS AGNTLAEAQV QCLSEIFERA VKREILEGEM
ALPDVPQEVL AKYPGIMAGI QVLEEQGFPI LVKDASLGGI YPVMCVTLMN PRTGGVFASF
GAHPSFEVAL ERSLTELLQG RSFEGLNDLP RPSFVSNAVT EPNNFVEHFI DSSGVVSWRF
FSAKSDFDFV EWDFSGQGKN SNTEEAATLL SILEGMGKEV YMAVYDQLGS VACRILVPGY
SEVYPVEDLI WDNTNKALSF RADILNLHRL DDESLEALLE RLDNSELDEY ADIATLIGIE
FDENTDWGQL TVLELKLLIH LALQQFEAAH ELVGAFLQYN DNTLERGLFY QALDVVLEVL
LDDDLDLEDY KVNFRRMYGN ARMDAVLGSV DGSVRFFGLT PTSMKLEGLD RHHRLIDSYK
KLHAARANAA AAAS
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