Gene Rmet_4819 details

Gene Information

• Locus tag: Rmet_4819
• Symbol: nirD
• ID: 4041681
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cupriavidus metallidurans CH34
• Kingdom: Bacteria
• Replicon accession: NC_007974
• Strand: +
• Start bp: 1468304
• End bp: 1468705
• Gene Length: 402 bp
• Protein Length: 133 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637980240
• Product: nitrite reductase small subunit
• Protein accession: YP_586950
• Protein GI: 94313741
• COG category: [P] Inorganic ion transport and metabolism; [R] General function prediction only
• COG ID: [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases
• TIGRFAM ID: [TIGR02378] nitrite reductase [NAD(P)H], small subunit

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.0378332
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 0.604915
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCCAAG CCCACCACCC AGAGACCTGG ACCGCGATTT GCACCTTGCG CGATATCGTG 
CCCAATACTG GTGTCTGCGC CCTGGTCGAC AGAAAGCAGG TCGCCGTCTT CCGCATCGGC 
CGCGGCGAGG AGGTCTACGC GCTGGCCAAC TTCGACCCGA ACGCGCAGGC AAACGTGCTG 
TCGCGTGGTC TGGTCGGCAA CCTTGGCCCG CGCACCGTGG TGGCGTCGCC GATCTACAAG 
CACCACTTCG ATCTGCGCAC CGGCGAATGC CTCGAAGCGC CCGAGCACTC GGTGGATGCT 
TATACCGCGC GGGTCTACGA CGGCAAGGTC TGGGTGGCCA CCGCAGCCAC GGCCCGCGAG 
GTGGAGGCAG AGGCGGAGGC CGAGGAAGAA CTGGCCGCCT GA 

 

Protein sequence

MSQAHHPETW TAICTLRDIV PNTGVCALVD RKQVAVFRIG RGEEVYALAN FDPNAQANVL 
SRGLVGNLGP RTVVASPIYK HHFDLRTGEC LEAPEHSVDA YTARVYDGKV WVATAATARE 
VEAEAEAEEE LAA