Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4790 |
Symbol | |
ID | 4041652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 1434297 |
End bp | 1435787 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637980211 |
Product | NodT family outer membrane lipoprotein |
Protein accession | YP_586921 |
Protein GI | 94313712 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.031941 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.791068 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAAACGCT TTGCCCGTGC CTCGCTGGCG GCGATGTTGC CGCTTGCGCT GGCCGCTTGC ATGACCGTCG GCCCTGATCA CAAGGTGCCC GACGATGCGG TCGTGAAGTC ATCGGCCGCC AATGGACCGT TTGCCGGCAC CGACAGCGAT GCGGTGTCGA TCGGCGACGT TCCGAACGAC TGGTGGCGTC TGTACGACGA TCCCCGTATC GACGAGCTGG TGCAGCAAGC GCTGGTGGCC AACACCGACC TGCGTGTGGC CGCCGCCAAT CTGAAGCGCT CGATCGCCGT GTATCACGAG GTGGAAGCCG AGAATCTGCC GGAAACGAAG TTCCGGGCCA GTGCGGAGCG CGGCCAGATC GCTGGCGAAC CGCTGCTGCA CGAAGAGAAG ATTCCGGTGA TGAACTTCGG CGACATTGGT CTCAATGTTT CGTACCTGAT TGACTTCTGG GGCAAGCTCA AGCGTGCCGA CGAAGCCGCC TTGGCATCGG CGCAGGCCAG CCATGCGGCG CTGGACCAAG CTCGTGTGGG CGTGGTGGCG GAGACCGTGC GTGCGTATGT GCAAGGATGC ACAGCCACGC ACGAACTACA TGTGGCCGCG CATCAGCTCG ACCTGCAGGA ACGCGGCGTG AAGCTGGCGC AGAAACTGGT CGATGCTGGC CGAGGTCAGC CGACCGATCT GCTGCGCGCC GAGGCGCAAG CCGACACCCT GCGTTCGGCA CTGCCGAAGT ATCGTGCGGA GCAGGAAGGC GCGGCATACC GCCTGGCGGT AATGCTGGGC AAGCCGCCGA CTGCGCTCGA TGTCAGCAGC GTGGCGTGCG AGCACGTACC GGCGTTGAAG CAGGCGCTGC CCGTTGGCGA TGGCATGGCG CTGCTCAAGC GCCGACCGGA CGTTCGCCAG GCCGAGCGCG AGCTGGCATC GGCAACGGCC AAGATCGGCG TGGCTACCGC TGACCTGTTC CCGCAGATTC GCATCGGTGC ATCGGCAGGT TTCACCGGTA TCCTCGACCA CCTTGGTCAG GCGCCGACCG CGCACTGGGG CTGGGGCCCC GCGATCTCGT GGACGATCCC GACCAGCGGC ACGCGCGCGC GCATCCACAA CATGGAGTAC GGGGCCGAAG GGGCGCTGGC TCATTTCGAC GGCGTGGTGC TGAAGGCGCT GCGCGAGACG CAGACTGCGC TGTCGGCCTA TACGCACGAA CTGGACCGGA ACGCGTCGCT GCGCTCGGCG CGCGACAAGG CCAATGAGGC AGCCCGCCAG AACCGGCTGC TGTGGCAGGC AGGCCGATCG CCGTATCTGC AGAGCCTGGA TGCCGACCGC ACGCTGGCCA ATACCGATGC CGCGCTGGCC GCATCCGACG CGCAGGTTGC GATGGATCAG ATCAACCTGT TCCTGGCGCT TGGTGGTGGA TGGCAGGATG CGCCGGCCAT TGCCAGTCAT CCGGTGGGCA AGGAGCCCGG ACAGGCCACG GAACACACCG AGGAGCACTG A
|
Protein sequence | MKRFARASLA AMLPLALAAC MTVGPDHKVP DDAVVKSSAA NGPFAGTDSD AVSIGDVPND WWRLYDDPRI DELVQQALVA NTDLRVAAAN LKRSIAVYHE VEAENLPETK FRASAERGQI AGEPLLHEEK IPVMNFGDIG LNVSYLIDFW GKLKRADEAA LASAQASHAA LDQARVGVVA ETVRAYVQGC TATHELHVAA HQLDLQERGV KLAQKLVDAG RGQPTDLLRA EAQADTLRSA LPKYRAEQEG AAYRLAVMLG KPPTALDVSS VACEHVPALK QALPVGDGMA LLKRRPDVRQ AERELASATA KIGVATADLF PQIRIGASAG FTGILDHLGQ APTAHWGWGP AISWTIPTSG TRARIHNMEY GAEGALAHFD GVVLKALRET QTALSAYTHE LDRNASLRSA RDKANEAARQ NRLLWQAGRS PYLQSLDADR TLANTDAALA ASDAQVAMDQ INLFLALGGG WQDAPAIASH PVGKEPGQAT EHTEEH
|
| |