Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4645 |
Symbol | |
ID | 4041506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 1275143 |
End bp | 1276189 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637980066 |
Product | extra-cytoplasmic solute receptor |
Protein accession | YP_586776 |
Protein GI | 94313567 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.176289 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGCAT CTCTTGTTCA TGCGCGGCCG CGCCGGTTGC GCCCGTTACG ACCACTACGC CCGTTGCCTG CCCTGTTGCC GACGGCCTTG TCCATCGCGA CGGTATGCCT GGCAGCCGTG ACGCCCGTGC CGGGCCAGGC GGCTTCGGAC TATCCGAGCC GGCCCATCAA GCTGGTGCTC GGCTTTCCCC CCGGTGGCAG TACCGATGTG GGCGCCCGCC GGGTGGCTGA CCAGCTCGGC AAACGGCTCG GCCAGCCGGT GGTGGTGGAG AATCGTCCGG GCGCGTCGGG CAATATCGCG GCCGCCTATG TCGCCAAGAC GCCGCCGGAT GGCTACACGC TGTTCTACGG CACCAACACC ACGCACGCGA TGAACGTCAG CCTGTATCCG AAACTGGGCT ACGACCCGGT GAAGGATTTC GTCCCGATCG TGCTGATGGG CAAGGTCTGG AACGTGCTGA GCGTGAATCC GTCGTACAAG GCCACCTCGC TGGCAGAGCT GATCGCGATG GCCAAGGCCG CGCCGGGACA GATCGACGTC GCGACACCGG GAAACTCGAC CAGTCCGCAT ATGTCGCTCG TGCTGTTGGA ATCCAGAGCG GGCATCAAGA TCACGCATGT GCCGTACAAG GGCAGCGCCG CGGCGCTGAA TGACGTAATG GGCGGCCAGA CGTCCGTGCT CTTCGACAAC CTGCCGGCCT CGCTGCCCTA TATCAAGGCA GGCAAGCTGC GCGCGCTGGC GGTTTCATCG CCCAAACGGC TGTCCGTCCT GCCTGACGTT CCGACCTTCG ACGAACTCGG CATCAAGGGC TACGAAGTTG CAGGGTGGGG CGCGCTGTGG GCGCCGGCCG GGACACCGCA GGCCATCGTG GACCGGCTCA ATCGCGAGAC CAATGCAGTC CTGAAGGATC CCACCATGAT CGCGCAAATG GAGGCGCTGG CATCTGACCC TCAGGGCGGT ACGGCGAAGT CGCTGGCAGC CTTTGCCGCA ACCGAAACGC AGCGCTGGGG CGAGGTTATC CGCGCCGCCG GACTCAAACT CGACTAG
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Protein sequence | MDASLVHARP RRLRPLRPLR PLPALLPTAL SIATVCLAAV TPVPGQAASD YPSRPIKLVL GFPPGGSTDV GARRVADQLG KRLGQPVVVE NRPGASGNIA AAYVAKTPPD GYTLFYGTNT THAMNVSLYP KLGYDPVKDF VPIVLMGKVW NVLSVNPSYK ATSLAELIAM AKAAPGQIDV ATPGNSTSPH MSLVLLESRA GIKITHVPYK GSAAALNDVM GGQTSVLFDN LPASLPYIKA GKLRALAVSS PKRLSVLPDV PTFDELGIKG YEVAGWGALW APAGTPQAIV DRLNRETNAV LKDPTMIAQM EALASDPQGG TAKSLAAFAA TETQRWGEVI RAAGLKLD
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