| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4582 |
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| Symbol | fadB |
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| ID | 4041443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1198671 |
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| End bp | 1200761 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637980003 |
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| Product | multifunctional 3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase /3-hydroxyacyl-CoA dehydrogenase |
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| Protein accession | YP_586713 |
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| Protein GI | 94313504 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.615246 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00280098 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGCGACA TTGTCAACTA CGAACTTCGC GGCCCGGTTG CCGTGCTTTC GATGAACAAG
GGGCCGGTCA ACGGTCTTGG CGCGGCACTG CGCACGGCCA TCGCCGATGC GGTGGATCGG
GCCAACGCGG ACCCGGCCGT GCAGGCCATC GTGCTGACCG GTACGCCCCG CGCATTCTCA
GCCGGTGCCG ACATCACCGA GTTCGGAACG CCCAACGCCT CGCGCGAGCC CAATCTGCGC
GTCGTGATCG ACCAGATCGA GGGCGGCGCC AAGCCGGTGG TTGCCGCGAT CGCCGGGCAG
TGCCTGGGCG GTGGACTGGA ACTGGCGTTG GGTTGCCACT TTCGCGTTGC GCTGCCGGAC
GCCCAGTTGG GCTTTCCGGA AGTCAAGATT GGCCTGCTGC CCGGTGGCGG CGGCACGCAG
CGCATGCCGC GCCTGATCGG CCTGGAGCCG GCCGTCAACA TGGTGACCCT CGGCAACCCG
GCTCCCGCCA AGAGTTTCGC GGGCACGCCG CTGATCGACC GTGTGGCCGA TGGCGACGTG
GTTGCCGCCG CGGTGGCATT CGCCCAGGAG CTCATCGCAG CGAAGACGCC ACCGCGCCGC
ACCCGCGCAC TGAGCGTCAG CCACCCGCAA GGCGAGTCTT TCCTGCAGTT CGCCCGCAAC
AGCGTGGCGC AACAAGCCAA GGGACAGATC GCACCGATGA AGGCGCTGGA AGCCGTGGCC
GCATCGTTGA CCAAGTCTTT CGACGAAGGA ATGCGCGTGG AGCGCGAAGG CTTCATGAGC
CTGATGGCCT CGCCGGAGTC GCGCGCGCTG CGCCATATCT TCAAGGCGGA GCATGCTGCG
TCGAAGATCG CCGATCTGCC GGCCGGCACG CCGCTGCGCG AGATCAGGAA GGTTGGCGTG
ATCGGTGCCG GCACCATGGG CGGCGGCATC ACGATGAACT TCCTTAACGC CGGGATTCCC
GTCGTACTGC TGGAGATGAA GCAGGAAGCG CTGGACAAGG GGCTGGCAAC CATCCGCCGC
AACTACGAAA ACTCGATGAA AAAGGGCAAG CTCAAGCCCG AGCAGGTCGA GCAGCGCATG
GGGCTGATCA CCGGCACGCT GAGCTATGCA GACCTGTCCG ATGTGGATCT GGTCATCGAG
GCCGTGTTCG AGAACATGGA CGTCAAGAAG ACCGTGTTCG AAACGCTGGA CAAGACATGC
AAGGCCGGCG CCATCCTGGC GTCGAACACG TCGTACCTGA ATCTCGACCG CATCGCTTCG
TTCACCAAGC GGCCGACCGA CGTGATCGGC CTGCACTTCT TCAGCCCGGC CAACGTGATG
CGCCTGCTGG AAATCGTGCG CGGCGCGCAG ACCGCGCCCG ACGTGCTGGC CACCTGCATG
GCGCTGGCGA AGAAGATCAA GAAGATCGCC GTGGTCTCCG GCGTGTGCGA CGGCTTTATC
GGCAATCGCA TGCTGGCGCG CTACGGAGCC GCCGCCGGCG CGTTGATCAA CGCCGGCGCG
CTACCGCAGC AGATCGACGG GGCGCTGCAA AAATTCGGCA TGGCCATGGG CCCATACCGC
ATGGGCGATC TGGCGGGCCT GGACATCGGC TATGCCACGC GCAAGCGCAA GGCTGCCGAG
GCCGGCGTAC CGCTTCGTCC GTCGGTGGCC GACAAGCTGG CCGAGGCCGG CCGCTTGGGC
CAGAAGACCG GCGCCGGCTG GTATCGCTAT GAAGCCGGCA ATCGCGACCC GATCCCGGAC
CCGGCCACTG AAGCCCTGAT CGCCGAATTC CGCAGCGCCC AGGGCATCAC GCCGCGCGCT
ATCAGCGATG AAGAGGTAGT GGAGCGCTGT ATCTTCGCCC TCGTCAACGA AGGCGCACGC
ATTCTGGAGG AAGGCATCGC CGCACGTGCC TCCGATCTGG ACGTGGTCTA TCTCAACGGC
TACGGCTTCC CCCGACTGCG CGGCGGCCCG ATGCTGTACG CCGACATGGT GGGCCTGCCC
AACGTCGTGC GGAGCCTGCG CCGCTTCGCC GCCGAACCGG GCGCCGACCC GGCCTGGCAG
CCTGCGCCGC TGCTGGTGCG CCTGGCCGAA GCAGGCAAGA GCTTCGATTG A
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| Protein sequence | MSDIVNYELR GPVAVLSMNK GPVNGLGAAL RTAIADAVDR ANADPAVQAI VLTGTPRAFS
AGADITEFGT PNASREPNLR VVIDQIEGGA KPVVAAIAGQ CLGGGLELAL GCHFRVALPD
AQLGFPEVKI GLLPGGGGTQ RMPRLIGLEP AVNMVTLGNP APAKSFAGTP LIDRVADGDV
VAAAVAFAQE LIAAKTPPRR TRALSVSHPQ GESFLQFARN SVAQQAKGQI APMKALEAVA
ASLTKSFDEG MRVEREGFMS LMASPESRAL RHIFKAEHAA SKIADLPAGT PLREIRKVGV
IGAGTMGGGI TMNFLNAGIP VVLLEMKQEA LDKGLATIRR NYENSMKKGK LKPEQVEQRM
GLITGTLSYA DLSDVDLVIE AVFENMDVKK TVFETLDKTC KAGAILASNT SYLNLDRIAS
FTKRPTDVIG LHFFSPANVM RLLEIVRGAQ TAPDVLATCM ALAKKIKKIA VVSGVCDGFI
GNRMLARYGA AAGALINAGA LPQQIDGALQ KFGMAMGPYR MGDLAGLDIG YATRKRKAAE
AGVPLRPSVA DKLAEAGRLG QKTGAGWYRY EAGNRDPIPD PATEALIAEF RSAQGITPRA
ISDEEVVERC IFALVNEGAR ILEEGIAARA SDLDVVYLNG YGFPRLRGGP MLYADMVGLP
NVVRSLRRFA AEPGADPAWQ PAPLLVRLAE AGKSFD
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