| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4579 |
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| Symbol | dppD |
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| ID | 4041440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1194999 |
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| End bp | 1195976 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637980000 |
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| Product | oligopeptide/dipeptide ABC transporter ATP-binding protein |
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| Protein accession | YP_586710 |
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| Protein GI | 94313501 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.170967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00444636 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAGAGC CCATTCTGCA GGTGAGAGAC CTGACCACGC GCTTTCGTAC CGACCGGGGC
GTGGTCACCG CCGTGGACCG GGTCTCCTTC GACGTGAACG CGGGAGAGAC GCTCGCGATC
GTCGGAGAAT CGGGATCGGG CAAGAGCGTG ACCGCGTTGT CGATTCTCGG CCTGATTCCG
CAACCGCCGG GCGAGATCGC GTCCGGTGAG ATCCGGTTCG AAGGCAAGGA TCTGCTCCGT
CTCAAGCCCG CCGAGATGCG CGCCATCCGG GGGAACCGGA TTGCGATGAT CTTTCAGGAG
CCGATGTCGT CGATGAATCC GGCGCTCACA GTTGGCAAGC AGATCGCGGA GCCAATTCGC
ATCCACGAGC ACCGCCCCTG GCGCGACGCC TACGACGAGG CCGTCGCGCT ACTGGCCCAG
GTGCAGATCC CCGAGCCGCG CAGCCGCGTG CAGGCGTATC CGCACCAATT CTCGGGCGGG
ATGCGGCAGC GCGCGATGAT CGCGATGGCG TTGGCCTGCA AGCCGAAGCT GATCATCGCC
GACGAGCCGA CTACCGCGCT CGACGTCACT GTGCAGGCGC AGATCCTGGA CCTGCTGAAG
ACGCTCGCGC AAAAGTCCGG TACGGCGCTG ATCCTGATCA CGCATGACCT GGGTGTGGTG
GCGCGATACG CGGACCGCGT CGCGGTGATG TACGGCGGCC GCCTGGTGGA GATGGCCTCG
GCGGAAGCGC TTTACCGCCA CCCAGCCCAC CCATACACGC GCGGGTTGAT CGCCTGTGTG
CCCCGTCTGG ATGGCGACAC CAGCCAGCCG CTGGTGCCGA TCGACGGCCA GCCACCAGAT
CTGACCGCGC TCGGGCAGGG CTGCGCGTTC CGGCCGCGCT GCAAGCTGGC CAACGAGACA
TGCGATCAGG CGCCGCCCCC GCTGCGCGAG ATCTCCCATC AACACCTCAA CGCCTGCTTC
CTCCATGACG CATACTGA
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| Protein sequence | MTEPILQVRD LTTRFRTDRG VVTAVDRVSF DVNAGETLAI VGESGSGKSV TALSILGLIP
QPPGEIASGE IRFEGKDLLR LKPAEMRAIR GNRIAMIFQE PMSSMNPALT VGKQIAEPIR
IHEHRPWRDA YDEAVALLAQ VQIPEPRSRV QAYPHQFSGG MRQRAMIAMA LACKPKLIIA
DEPTTALDVT VQAQILDLLK TLAQKSGTAL ILITHDLGVV ARYADRVAVM YGGRLVEMAS
AEALYRHPAH PYTRGLIACV PRLDGDTSQP LVPIDGQPPD LTALGQGCAF RPRCKLANET
CDQAPPPLRE ISHQHLNACF LHDAY
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