| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4538 |
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| Symbol | soxR |
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| ID | 4041397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1145681 |
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| End bp | 1146190 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637979960 |
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| Product | transcriptional activator for superoxide response; Fe-S center for redox-sensing (MerR family) |
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| Protein accession | YP_586672 |
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| Protein GI | 94313463 |
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| COG category | [K] Transcription |
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| COG ID | [COG0789] Predicted transcriptional regulators |
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| TIGRFAM ID | [TIGR01950] redox-sensitive transcriptional activator SoxR |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.485722 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.455986 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCG CCCTCGAAGA TCAGGAAGAC CACCCGTTGC GATCCGGCGA TCCGCTCACC
GTTGGTGAAG TTGCCGCGCG TAGCGGCGTC GCGGTGTCCG CGCTGCATTT CTATGAATCG
AAGGGATTGA TCTGCAGCAC ACGAAGTGCC GGCAACCAGC GCCGGTATCC GCGCGGGATA
CTGCGGCGCC TTGCGGTCAT ACGGGTGGCC CAGCGCATGG GCTTGCCGCT GTCCGTGATT
GCCGAAGCGT TCAGCCGCCT GCCGGATGAC AAGGCGCCGA CGGTTGCGGA TTGGCGGCGG
CTCTCGGCCG TATGGCGCGC GGATCTGGAC GCGCGCATCC GCACGCTGAC CCAACTCCGC
GATCAGCTCG ATGGCTGTAT CGGATGCGGG TGTCTGTCCC TGAAGGAATG TCCGTTGCGC
AATCCGCAGG ACGCGCTGGC GGAAGAAGGG CCCGGCCCGC ATTTCGGGGC CGGGCCCTGT
GAGCACCGGA AATCGGGCAA GGCGCGATGA
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| Protein sequence | MKRALEDQED HPLRSGDPLT VGEVAARSGV AVSALHFYES KGLICSTRSA GNQRRYPRGI
LRRLAVIRVA QRMGLPLSVI AEAFSRLPDD KAPTVADWRR LSAVWRADLD ARIRTLTQLR
DQLDGCIGCG CLSLKECPLR NPQDALAEEG PGPHFGAGPC EHRKSGKAR
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