| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4530 |
|---|
| Symbol | |
|---|
| ID | 4041389 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 1137140 |
|---|
| End bp | 1138231 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637979952 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_586664 |
|---|
| Protein GI | 94313455 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.744271 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0474093 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGCGC GCCTGCTTTC CCTGATCGCG TTCTGTATGG CGGCACTGGC CCATGCGGCC
GAGCCGGCGC CGATCGTTCG CGTCGAGGTT GGCGGCAACG GTGCCCAGCG TCCCGCCGTG
GTTGGGCAGT CCGTCCAGAT TTCGGTGACG ATCCTGGCGC CGAACTTCTT CATGTCGGCG
CCGGTGTTCC CGACGCTTCA GGTGGCTGGC GCCGTGATCA CGATGCCCGA CGATCGCGCC
GTCAACTCGA CCGAGACGGT GGGCGGCGTC AGCTATGCGG CGATCACCAA GACCTATGTA
CTGACTCCGC AAAGCGCCGG CGATTTCACG CTGCCGCAGC CGGAGATCCC GTTTACCTAT
GCGGGTGGCG ACGGCAAGCC GCTCTCCGGC AGCGTCACGT TGCCACCCAC GGTGATTCAT
GCCGGCGGGC AGGTTGGAAG TGGTGCGCCG GGCGCGGCAT CCGGCGTGCA GGCAAATGTC
GGCACGCTTC CGGCCGGACC GCTCCAGATC ACGCAACAGT TCGATCGCCC GGTCACGGGC
AAGGATGCTC ACCTGCGCGC AGGCGATGCC GTGGTCCGGA CGATCACGAT CGTCGCGCCC
AATGCGCCGG CCATGATGAT CCAGCCGCCC GTGCTCGAGG CGCCAGGCGG GGTGAAGCTG
TTCAGGGCGG ATCCGAAGCT ATCCGATGGC GTGGCCGGTG CCGGCGAGAC CCCGGGCGGG
CGGCGCGTGG AGCGCGTGAC CTATGTGTTC GAGTCCAGCG GCACTCACAC GCTGCCGGCG
GTGACCGTGA AATGGTATGA CCCCGCCAGC GGCAAGCCTT CCGAGGCTGT GGCCCCGGCC
ATTACGGTGG AAGTGGGCCG AGCTGGGGCG GGCCTGGGTC TTGCGCCGAC CGGCGACCCG
TTCAGTGGGG AGGACTGGTG GCCGGCCTGG CTCGACGGCA GGGTCTTCGC TGGATTGGTG
GGGCTGGCCG TGATCGCCCT GGCGGCGTTC GGGCTGCGCA GGCGGATGCC GGCCTGGTGG
CATACGCAAC GGAAGGCCTG GAAGGCCGCC TGGCGCGAGT TGCGTGGCCC GCTGCCACCG
CTCAACCCAT AA
|
|---|
| Protein sequence | MIARLLSLIA FCMAALAHAA EPAPIVRVEV GGNGAQRPAV VGQSVQISVT ILAPNFFMSA
PVFPTLQVAG AVITMPDDRA VNSTETVGGV SYAAITKTYV LTPQSAGDFT LPQPEIPFTY
AGGDGKPLSG SVTLPPTVIH AGGQVGSGAP GAASGVQANV GTLPAGPLQI TQQFDRPVTG
KDAHLRAGDA VVRTITIVAP NAPAMMIQPP VLEAPGGVKL FRADPKLSDG VAGAGETPGG
RRVERVTYVF ESSGTHTLPA VTVKWYDPAS GKPSEAVAPA ITVEVGRAGA GLGLAPTGDP
FSGEDWWPAW LDGRVFAGLV GLAVIALAAF GLRRRMPAWW HTQRKAWKAA WRELRGPLPP
LNP
|
|---|
| |