| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4519 |
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| Symbol | |
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| ID | 4041378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1123601 |
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| End bp | 1124959 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637979941 |
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| Product | exonuclease/RNA metabolizing protein |
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| Protein accession | YP_586653 |
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| Protein GI | 94313444 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0267273 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00562504 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCACATCC AGTTCCTTGG GGCAACGGAC ACCGTGACCG GTTCGCGCTT TCTGATCGAC
ACCGGAGAAG CGCGGGTGCT GATCGACTGC GGACTGTTTC AGGGCTACAA GGCCCTGCGG
CTACGTAACT GGGATCGCTT TCCGATCAGC CCGGAAAGTC TCGATGCCGT GGTGTTGACA
CATGCGCATA TCGACCACAG CGGCTATCTG CCCCTGTTGG TGAAACGCGG TTACAAGGGG
CGCGTGCACT GTACGACGGG AACCGCGGAG CTTTGCGGCC TGCTGCTGCC GGACAGCGCC
CATCTGGCGG AAGAAGACGC CAACTATGCC AACCGCAAGG GGTATTCGCG TCATCAACCG
GCGCTGCCGC TCTATACCGT GGCGGATGCC ATGCATGCGC TGGAACATCT GAAGCCCGCG
CCTTACAGCA AGCGCGTGAC AATCGCACGC GGTGTGGAAG CGGAGTTTCA TCGCGCGGGC
CATATTCTTG GCTCGTCCAG CGTGACGATC CATGCCAAGG GCCGGCGCAT CCTGTTCTCC
GGCGACCTCG GCCCGCAGGA CGACATGCTG ATGCGGCCGC CGGAGCCGCC CACCGCGGCG
GATTACCTCA TCGTGGAATC GACTTACGGT GACCGCCTGC ACCCGGAGGG CGATCCCATC
GAGCTGCTGG CCGATATCAT CCGCAAGACC GTTGCCCGGG GCGGCAGCGT GATCATTCCC
GTCTTTGCGG TTGGGCGCGC CCAGTTGCTG CTGTATTGCC TCTACCGGCT GCGCCAGCGA
CGGCGCTTTC CCGATGTGCC CATCTATCTG AACAGCCCGA TGGCCATTGA CGCCACGCGG
ATTCTCACCG AGCACACGGA CGAACTGCGC ATCGACCCCG AAACGTGCGC GGCTGCTTGT
TCGGTGGCGA TTCCGACCCG GAGCATGGAG GAGTCGATCC GCATCAACCG GGTGGATCAG
CCGAAAATCA TCCTGGCCGG TAGCGGAATG TTGACCGGCG GGCGCGTGGT GCATCACCTT
GAATCGTTCG GGCAGGACCC GCGCAGCACT TTTCTGCTGG TGGGGTTCCA GGCGGCGGGA
ACGCGGGGGG CGACGCTGGC GTCCGGTCAG CGCACATTGC GTATGCACGG GCGCGAAGTC
GAACTGCGTG CTTCAGTCGA ACAGATTCGC CATTTCTCGG CACATGCCGA TGCGGATGGG
CTGATGGACT GGATGAGTGC CATCGGGACG CCGCCACGGC AGACGTTCAT CGTCCACGGC
GAGCCCGGTG CCGCCGATGC GCTACGCCAG CGCATCGAGC ATTCGCTGCA TTGGGATGTC
ACGATGCCCG AGTACCGGGG TATCTATCCG CTCGACTAA
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| Protein sequence | MHIQFLGATD TVTGSRFLID TGEARVLIDC GLFQGYKALR LRNWDRFPIS PESLDAVVLT
HAHIDHSGYL PLLVKRGYKG RVHCTTGTAE LCGLLLPDSA HLAEEDANYA NRKGYSRHQP
ALPLYTVADA MHALEHLKPA PYSKRVTIAR GVEAEFHRAG HILGSSSVTI HAKGRRILFS
GDLGPQDDML MRPPEPPTAA DYLIVESTYG DRLHPEGDPI ELLADIIRKT VARGGSVIIP
VFAVGRAQLL LYCLYRLRQR RRFPDVPIYL NSPMAIDATR ILTEHTDELR IDPETCAAAC
SVAIPTRSME ESIRINRVDQ PKIILAGSGM LTGGRVVHHL ESFGQDPRST FLLVGFQAAG
TRGATLASGQ RTLRMHGREV ELRASVEQIR HFSAHADADG LMDWMSAIGT PPRQTFIVHG
EPGAADALRQ RIEHSLHWDV TMPEYRGIYP LD
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