Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4475 |
Symbol | |
ID | 4041334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 1075183 |
End bp | 1076361 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637979897 |
Product | branched-chain amino acid ABC transporter periplasmic amino acid-binding protein |
Protein accession | YP_586609 |
Protein GI | 94313400 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00447507 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | TTGGCCGCCG TGTCGGCAGT CCCTGGCGTA GTGACCTATT CACGCAGTGT CCTGGCAGCC GGGGAGGCCA TCGAGCTCGG GTGTCCCGTG CCGATGTCCG GCGCGTTTGC GGCGAACGGG AAGTTCGCGG ATCTCGGCAT GAAACTGGCC GTGGAGCAAT ATGGCAAGGT CCTGGGACGA CCGTTGCAGT ACAGCGTCCT CGATACCGAG GGCAAGCCAG CCACGGCGGT CAGAAAGGTG CAGGAGTTGG CGCAGCAGAA AGCCGCCCGC TACTTTGCCG GCGGCATCCT GTCCTCGGAG TCGCTTGCCA TGGGCAAGGA AGCGGAGAAG CTTGGCGGCG TGTTCGTGAC GACCGCTGGC GCCGACGAAA TCACCGGCAA GGACTGCAAC CGGGCCACGT TCCGCTGGTC CGTTCCCACC TATGGCGCGA TCGAGCGCAC GGTGCGACCG CTGATCGAAG CGATGCCGAA GGCCAAGCGC TGGTACACGA TCACCCCCCA GTATGTGTTT GGCGACGGAC TGCTTTCCGC AGCCAAGGCC ATCTTCAAGG AAAAGGGCAT CGAGCACGTC GGCAACAGCT ATCACGCGCT AACGGAGAAG GAATTCAGCG GCTACCTCAC CAACGCGATG GCCGCCAAGC CGGATGTGTT GCTGATCCTG AACTTCGGCT CGCAGTCGTC GGACACCCTC CGGCAGGCCG TGAGCTTCGG CATGAAGAAG AACTGCACCA TCCTCGTCGC CTGGGCGTCG GGTCTGGAAC AGTTCGAATC GCTCGGCGCC GACCTCTGCG AAGGCGTCTA CTTCGGCGCG CAGTACTGGC ACGGCGTGGA CACACCCCTG AACCGCGATC TGGTCAAGCG CGCCAATGAG AAGTTCAAGG CGAATCCGAA CTACAGCCTT GCCGGCTCGT ATATCTGCAC GAAGATCCTG GTGGACGGCA TGATCAAGGC AGGCTCGGCC GACCCGAAGG CCGTGGTGGC CGCGCTGGAA GGTCTGAAGT ACGAGGGCCT GACGGGTCCC GAAGAGATCC GGGCCGGCGA CCATCAGGTA CTCAAGAACT ACTATCTGCT GAAGGGCAAA GCCAAGTCCA AGATGAAGGA CAAGGATGAC TTTGCCGAGA TCGTGAGCGT CGGCAAGGCA TTCCTGCCGC TCGATCAGAC GCAGTGCAAG ATGGCATAA
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Protein sequence | MAAVSAVPGV VTYSRSVLAA GEAIELGCPV PMSGAFAANG KFADLGMKLA VEQYGKVLGR PLQYSVLDTE GKPATAVRKV QELAQQKAAR YFAGGILSSE SLAMGKEAEK LGGVFVTTAG ADEITGKDCN RATFRWSVPT YGAIERTVRP LIEAMPKAKR WYTITPQYVF GDGLLSAAKA IFKEKGIEHV GNSYHALTEK EFSGYLTNAM AAKPDVLLIL NFGSQSSDTL RQAVSFGMKK NCTILVAWAS GLEQFESLGA DLCEGVYFGA QYWHGVDTPL NRDLVKRANE KFKANPNYSL AGSYICTKIL VDGMIKAGSA DPKAVVAALE GLKYEGLTGP EEIRAGDHQV LKNYYLLKGK AKSKMKDKDD FAEIVSVGKA FLPLDQTQCK MA
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