Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4468 |
Symbol | czcA2 |
ID | 4041327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 1064352 |
End bp | 1067483 |
Gene Length | 3132 bp |
Protein Length | 1043 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637979890 |
Product | heavy metal cation tricomponent efflux pump HmuA |
Protein accession | YP_586602 |
Protein GI | 94313393 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3696] Putative silver efflux pump |
TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.186725 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0193618 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGAAC GTATTCTCCG CTTCGCCATC GCGCAGCGAT GGCTCGTGAT GCTGGCGGTC CTCGGCATGG CCGGGCTCGG CATCTACAAC TACAGCCGCC TGCCGATCGA CGCCGTCCCG GACATCACCA ATGTCCAGGT ACAGATCAAC ACTTCGGCGC CCGGTTACTC GCCGCTTGAA ACCGAGCAGC GCGTCACCTA TCCGCTTGAG GTCACCATCG CCGGCCTGCC GGGCCTGGAG CAGACCCGTT CGCTGTCGCG CTACGGCCTG TCCCAGATCA CGGTGATCTT CAAGGACGGC ACGGATATCT ACTTCGCGCG CCAACTCGTC AACCAGCGCA TCCAGGAAGC CAAGGACAAG CTCCCGGAAG GCGTGGTGCC TGCCATGGGC CCCATTTCCA CCGGCCTCGG CGAGATCTAC CTGTGGACCG TCGAAGCCGA GCCGGATGCG CGCAAGCCGG ATGGCACGCC ATACACGCCC ACCGACCTGC GGGAGATCCA GGACTGGGTC ATCAAGCCAC AGTTGCGCAA CGTGCCCGGC GTTACCGAAA TCAACTCGAT CGGCGGCTTC GCCAAGGAAT ACCTGGTAGC GCCAAGCCCT GAAAAGCTGG CCTCGTACGG CTTCTCGCTG CAGGACGTGG TGCAGGCGCT CGAACGCAAC AACACCAATG TCGGCGCCGG CTATATCGAG CGGCGCGGCG AGCAGTACCT GGTGCGCGCG CCCGGGCAGG TCAAGTCGAC CGACGACATC GGGGACGTCA TCGTGGGCAC CGCTCAAGGC TTGCCGATCC GTGTCCGTGA TCTTGCCGAA GTGGACCTTG GCCGGGAGCT GCGCACCGGC GCCGCCACCG ACAACGGCCG CGAAGTGGTA CTGGGTACGG TCTTCATGCT GATCGGCGAA AACAGCCGCG CGGTATCCCA GGCCGTAGAT GCGCGCATGG CCGTGATCAA CAAGTCCTTG CCGGCAGGCA TCAAGGCGGT CACCGTCTAC GATCGGACCA ATCTCGTCGA CAAGGCCATC GCCACCGTCA AGAAGAACCT GCTCGAAGGC GCAGTGCTGG TGATCGCCAT CCTGTTCCTG TTCCTCGGCA ACCTGCGCGC GGCGCTGATC ACCGCCATGG TGATCCCGCT GTCGATGCTG TTCACGTTCA CCGGGATGGT GTCATACAAG ATCAGCGCGA ACCTGATGAG CCTGGGCGCG CTCGACTTCG GCATCATCGT CGACGGCGCC GTGGTGATCG TCGAGAACTG CGTCCGCCGT CTGGCTCATG CGAAAGAGCG CCTGGGACGC CCGCTGACAC GCGCCGAACG CTTCGAGGAA GTGTTCGCGG CCGCGAGCGA GGCACGCCGG CCACTGGTTT ATGGCCAGCT CATCATCATG ATCGTCTACA TCCCGATCTT TGCGTTGAGC GGAGTGGAGG GCAAGATGTT CCACCCGATG GCGATGACCG TAGTGCTGGC ACTGATTGGC GCGCTGATCC TCTCCGTGAC TTTCGTGCCG GCAGCCGTGG CGCTGTTTAT TGGCGGCGGC GTCGAGGAAA AGGAAAACCG CATCATGGGC TGGGCTCGCC GCGGATACGA GCCGGTGCTC AAGCGCGCCC TGGCCAATAC GCCGGTGGTG CTCGCTGGCG CGGGCATGGC GGTGCTGCTT AGCGGGCTGG TGGCGCTGCG CCTCGGGAGC GAGTTCATCC CCAACCTGAA CGAAGGCGAT TTCTCGGTAC AGGCGCTGCG CATTCCGGGT ACGAGTCTGA CGCAGTCGGT GGCGATGCAG CAGCAGATCG AAACGCGCCT CAAGGCAACC TTCCCCGAGA TCGAGCGCAT TTTCGCGCGC ACGGGTACCG CGGAGATCGC ATCGGATCCG ATGCCGCCCA ACATCTCGGA TGCCTACATC ATGCTGAAAC CACGCGACAA GTGGCCAGAT CCCTCCCGTT CCCGCGAGTC GCTGCGCGCC GCGATCGAAG GCGAACTGGA GAAGATTCCG GGCAATCGCT ACGAGTTCTC GCAGCCGATC CAGTTACGCT TCAACGAGCT GATTTCAGGC GTGCGCAGTG ACGTGGCGGT CAAGCTGTTC GGCGACGATA ACGAGGTGCT TGATACCACG GCGCAGCGCA TCGCCAAGGT CCTGCAGACC GTGTCCGGCG CCACAGAGGT CAAGGTCGAA CAGACCACGG GTCTACCGGT GCTGACCGTC GACGTCGACC GCGCCCGCGC GGCACGCTAC GGGCTGAACA TGATCGACGT TCAGGACACC GTCGCCATCG CCGTGGGCGG CCGCGACGCC GGCGTGTTCT ACCAGGGCGA CCGCCGCTTC AACATTGGCG TGCGCCTGCC GGAAGGCATT CGCGCCGACG TGGAAGCGCT GCGACGTCTG CCTATCCCCC TGCCCAAGGG CACCAACGCG GCAACGAGCT ACATTCCGCT CGGCGAGGTC GCCACGCTGA CCATTGCGCC AGGTCCGAAC CAGATCTCAC GGGAAAACGG CAAGCGCCGC ATCGTCATCA GCGCCAATGT GCGGGGACGG GATCTCGGCA CGTTCGTCCC CGAAGCCGTG GCGGCCATCG ACGCGCGCGT GAAGATCCCC ACCGGCTACT GGATTGCCTG GGGTGGCACA TTCGAGCAGT TGCAGTCGGC GACGGAACGG CTCCAGATCG TCGTGCCCGT GGCGCTGCTG ATGGTATTCG TACTGCTGTT CGCCATGTTC GGCAATGTGC GCGACGGGTT GATCGTCTTC ACCGGGATTC CGTTTGCATT GACCGGTGGC GTCCTGGCCT TGTGGATGCG CGGTATTCCG TTGTCGATCT CCGCGGCGGT GGGCTTCATC GCGCTCTCCG GTGTGGCGGT GCTCAACGGA CTGGTCATGC TCTCGTTTAT CCGCTCGCTG CGTGAGGAAG GCCGATCGCT CGACGATGCC GTGTTCAACG GCGCGCTGAC GCGGCTGCGC CCGGTGCTGA TGACGGCGCT CGTGGCATCG CTCGGATTCG TGCCGATGGC GATTGCCACG GGCACCGGCG CAGAGGTGCA GCGGCCACTG GCCACGGTCG TGATCGGCGG GATATTGTCA TCCACCGCGC TGACGCTGCT GGTACTACCG GTGCTGTATC GCTGGGCCCA CGGGCGATTG GCGAGCCGCT GA
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Protein sequence | MFERILRFAI AQRWLVMLAV LGMAGLGIYN YSRLPIDAVP DITNVQVQIN TSAPGYSPLE TEQRVTYPLE VTIAGLPGLE QTRSLSRYGL SQITVIFKDG TDIYFARQLV NQRIQEAKDK LPEGVVPAMG PISTGLGEIY LWTVEAEPDA RKPDGTPYTP TDLREIQDWV IKPQLRNVPG VTEINSIGGF AKEYLVAPSP EKLASYGFSL QDVVQALERN NTNVGAGYIE RRGEQYLVRA PGQVKSTDDI GDVIVGTAQG LPIRVRDLAE VDLGRELRTG AATDNGREVV LGTVFMLIGE NSRAVSQAVD ARMAVINKSL PAGIKAVTVY DRTNLVDKAI ATVKKNLLEG AVLVIAILFL FLGNLRAALI TAMVIPLSML FTFTGMVSYK ISANLMSLGA LDFGIIVDGA VVIVENCVRR LAHAKERLGR PLTRAERFEE VFAAASEARR PLVYGQLIIM IVYIPIFALS GVEGKMFHPM AMTVVLALIG ALILSVTFVP AAVALFIGGG VEEKENRIMG WARRGYEPVL KRALANTPVV LAGAGMAVLL SGLVALRLGS EFIPNLNEGD FSVQALRIPG TSLTQSVAMQ QQIETRLKAT FPEIERIFAR TGTAEIASDP MPPNISDAYI MLKPRDKWPD PSRSRESLRA AIEGELEKIP GNRYEFSQPI QLRFNELISG VRSDVAVKLF GDDNEVLDTT AQRIAKVLQT VSGATEVKVE QTTGLPVLTV DVDRARAARY GLNMIDVQDT VAIAVGGRDA GVFYQGDRRF NIGVRLPEGI RADVEALRRL PIPLPKGTNA ATSYIPLGEV ATLTIAPGPN QISRENGKRR IVISANVRGR DLGTFVPEAV AAIDARVKIP TGYWIAWGGT FEQLQSATER LQIVVPVALL MVFVLLFAMF GNVRDGLIVF TGIPFALTGG VLALWMRGIP LSISAAVGFI ALSGVAVLNG LVMLSFIRSL REEGRSLDDA VFNGALTRLR PVLMTALVAS LGFVPMAIAT GTGAEVQRPL ATVVIGGILS STALTLLVLP VLYRWAHGRL ASR
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