Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4451 |
Symbol | uspA10 |
ID | 4041310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 1047529 |
End bp | 1048014 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637979873 |
Product | universal stress protein UspA |
Protein accession | YP_586585 |
Protein GI | 94313376 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.15852 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.144884 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCAGC ACATTCTTGT CGCCGTCGAC GATAGCCCCT GCGCGCGTCG CGCCCTGAAC GAAGCCGTCG GCCTTGCCAG CGCGTTTCAC GCAAAGCTCG AGATCCTGCA CGTCATCGAC TACAGCTTCC TGCAGTACGA CTTCGGCTAT GGCGATTTCA CCGAGCTACG CCCACAGTTG ACGGCAGCCG GCGAATCGCT TCTCAAGGAA GCTGGCGAGA TCGCCGGGGC TGCCGGGCTC GAGCATCACG AAACCCTGAT CGACGATCTG GCGACGATGG GCAACATCGC GGACCGCGTC AACGGCTATG CGCGAAGGTG CAGCGCCGAT ATCGTCGTCA TCGGCACGCA TGGCCGGCAC GGCTTGAAGC GCATGCTGCT TGGCAGCGTC GCCGAAAGCC TGGCACGCGA TTGCCCGGTC CCCGTTGTCC TGGTGCGTGA CGACTCCCCC GCCAGGACCG CTGAACGCCC GGTCGCCCAG AAGTAA
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Protein sequence | MHQHILVAVD DSPCARRALN EAVGLASAFH AKLEILHVID YSFLQYDFGY GDFTELRPQL TAAGESLLKE AGEIAGAAGL EHHETLIDDL ATMGNIADRV NGYARRCSAD IVVIGTHGRH GLKRMLLGSV AESLARDCPV PVVLVRDDSP ARTAERPVAQ K
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