| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4367 |
|---|
| Symbol | |
|---|
| ID | 4041225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | + |
|---|
| Start bp | 965021 |
|---|
| End bp | 965950 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637979788 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_586501 |
|---|
| Protein GI | 94313292 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.764337 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.231435 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGTAT CGCTTCCCCA GTTGAAGGCT TTCGCTGCGG TGGCTCGCCA AAAGAGCTTC
ACGCGAGCCG CGGCAGAGCT TGGGCTGACA CAGTCGGCCA TCAGCCGGAG CGTGCGCGAA
CTGGAAGAGG AGATCGACCA GCGGCTGTTC GATCGCACCA CGCGCCAGGT GGAGTTGACC
GATGCGGGCG AGATGCTGTC GCAACGGATC TGCCATCTGG TCGAGGAAGT CGAACAGACA
CTGCGCGATA GCCACGGCAC CGGCAAACCG TGTGAAGGCA CGGTGCAGAT CGCCACCGAT
CCGGTGTTGT CATCGATGAC GCTGCCGATG TGGGTGGCTG GCTGCCGCAA GGCGTGGCCC
GGCATCGGCA TCACGCTGCG CGACTGCTCG CATGAATGCG TGCTGCAGCG TGTGCGTAGC
GGAGAGGTCG ATTTCGGCAT CGCCAGCAAT CCGGCGCCTT GCGACGATCT TTACTGTGAA
CCCCTGTGCG TGGATCCTTT CCAGGCCGTG CTGCCGGCGG GGCATCCTCT GGCGGCGCGG
GAGTCACTGG GGTGGGGCGA ACTGGGCGAT GCGTCGGTGC TGACGCTCGA TCAGAGTTCC
GGCATCCAGC CCGCGGTGGA GCGCGCGCTG GCCGCCTATC GCGTACGCCC GGGCTCGTTG
CAGGTACTGG GCCATTTTGC TGCGGTATTC GGCATGGTGG CGATGGGGTT GGGGATCGGT
GTGGTGCCAT CGCGGGCGCA GGCCGCTGGT ATTGCGCCCT CGGCAGTGCT GCGCCCGTTG
CGTCCGCAGG TGACCTCGAA CGTCATGCTC GTGCGCCGCA AGGCCCGGTC GCTCAAGCCA
AATGCGGCGG CGGTGTGGGA CAACCTGCGT GCCCAGGAGT ACGAGCGTGG CGATTACGGC
AATCAGGGGT TGCTGAAGAA AGTGGGGTAG
|
|---|
| Protein sequence | MNVSLPQLKA FAAVARQKSF TRAAAELGLT QSAISRSVRE LEEEIDQRLF DRTTRQVELT
DAGEMLSQRI CHLVEEVEQT LRDSHGTGKP CEGTVQIATD PVLSSMTLPM WVAGCRKAWP
GIGITLRDCS HECVLQRVRS GEVDFGIASN PAPCDDLYCE PLCVDPFQAV LPAGHPLAAR
ESLGWGELGD ASVLTLDQSS GIQPAVERAL AAYRVRPGSL QVLGHFAAVF GMVAMGLGIG
VVPSRAQAAG IAPSAVLRPL RPQVTSNVML VRRKARSLKP NAAAVWDNLR AQEYERGDYG
NQGLLKKVG
|
|---|
| |