Gene Rmet_4328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4328 
Symbol 
ID4041186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp921650 
End bp922624 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content59% 
IMG OID637979749 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_586462 
Protein GI94313253 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCT ACCGTCAGAA CTTTATTGAA GCCAACGGCA TCCGACTGCA TGTCGCAGAG 
CAAGGCGAGG GGCCCTTGGT GCTGCTTTGC CACGGGTTTC CTGAGACATC GCATGCTTGG
CGACATCAAC TCGCAGCACT GGCGCAAGCT GGTTTTCACG CTGTCGCGCC AGACTTGCGC
GGATATGGGT TGAGCGACTG CCCTGAAGGT ATTGGGCAAT ACACGACGCT TGACGTTGTC
GGCGATCTCG TTGCGCTCGT TGGCGTACTC GGCGAAAGCG AAGGGGTCAT CGTCGGAAAC
GATTGGGGTG CGACTATTGC GTGGCAGGCG GCAATGCTCC GGCCCGACCG ATTTCGGGGT
GTCGTGGCGC TCGGCGTTCC GATGATGGGC CGCGCGCCAT TTGCGCCAAG TCGCCTGTTT
CCGCAGAACG ACCAAGCGTG GTTTTACACC CATTACTTCT CCAAACCTGG ACTCGCCGAA
AGCGAGCTTA AGCGAGACGT TGCTGCGACC CTTCGCAAGA TCTACTTTTC GGCCTCGGGC
GATGTCGGCG TTCGCGGCGC CAGCACTCCG AACCCGTTCG GACTGGTACC CCGGGGCAAG
CAATATCTCG ATGCCCTCGG TGATTTCCCG TCATTGCCGG ATTGGCTTGG CTCCTCCGAT
CTCGAAGCGT TCGTACGCGC CTTCAATGTC TCTAGCTTTC GAGGCGGCCT GAACTACTAC
CGGAACCTCG ACAGAAACTG GGAAATGCAA GCAGCGTTTG AGGGGCTTCG CATCGAAGTG
CCTGCCCTTT ACCTTGTCGG CGAAAGAGAC ACAGGGCTCG CTATGCCTGG CATGCGTGAA
ATCATCGATG CCATGCCCAA AATCGTACCA AAGCTGCGCA AGTCTGATGT GGTACCGACG
GCAGGACACT GGTTACCCCA AGAAGCACCG GACGTCGTCA ACGCAGCGTT AGTCGAGTTT
CTCCGGGAGC TTTGA
 
Protein sequence
MSAYRQNFIE ANGIRLHVAE QGEGPLVLLC HGFPETSHAW RHQLAALAQA GFHAVAPDLR 
GYGLSDCPEG IGQYTTLDVV GDLVALVGVL GESEGVIVGN DWGATIAWQA AMLRPDRFRG
VVALGVPMMG RAPFAPSRLF PQNDQAWFYT HYFSKPGLAE SELKRDVAAT LRKIYFSASG
DVGVRGASTP NPFGLVPRGK QYLDALGDFP SLPDWLGSSD LEAFVRAFNV SSFRGGLNYY
RNLDRNWEMQ AAFEGLRIEV PALYLVGERD TGLAMPGMRE IIDAMPKIVP KLRKSDVVPT
AGHWLPQEAP DVVNAALVEF LREL