Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4318 |
Symbol | |
ID | 4041176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 912409 |
End bp | 913923 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637979739 |
Product | GntR family transcriptional regulator |
Protein accession | YP_586452 |
Protein GI | 94313243 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.632192 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTGGTTTC GGGCCGCGTA CTCCTCTTCA ACGCCGCAAC TAGCCCTAGA ATCCGGCGGA ATCGCCATTC GCGCCTACAA GATGAACGCC CACATCAAGC TCCGCGGCCG CCGTGACCTG GCTGGTCAGA TCTATCGACA GATTCGCGCC AGCATCGTCG ACGGACGGCT CGCGCCAGGA GAACGCCTAC CCTCCACACG CACGCTGGCG TCGGAGCTCG ACGTCTCCAG AAAGACGACG CTCGATGTGT TCGAGCGGTT GATCGGCGAA GGCTATCTGC GGTCTCGTAC CGGCGACGGA ACCTTCGTGT CCGATGAGAT GACGCGCCTG GCGCCTACGC CGCCGCGCGA GCGGATCGTG CAGGCCACTG GAGCGGTGTG GGAAACGCTA CCCGAGGCAT TGCCCGCGAG CCGGAAAGAC ATGCCGGCAC GCTTCGATTT CGTAGGCGGC GTCACCGACA AGCGCCTGTT TCCGTTCGAC AAATGGCGCA AATGCGTTAG CCACGCGCTG CGCATCCAGG CGCGCGGAAA CGGTTCTTAT CACGACCCAT CGGGCGATCA GGAACTGCGT CTGGCCATCT CGCGTTATCT GGCTTCGAGC CGCGCGGTGG TCAGCAACTG GCAGGACGTC ATCGTTACCA ACGGAGCGCA ACAGGCCATT GAACTGCTGG CGCGCGCGGT CATCCGGCCA GGCGATGTGA TCGCGGTGGA AGATCCCGGC TATCCGCCCG CGCGAAGCGT CTTTACCGCG GCGGGCGCCA GGGTGATCGA CGTACCGGTC GACAAGGACG GTCTGCGGGT GGATGCCCTG CCGTCGAAGG CGAGGATGGT CTATGTCACG CCGTCCCACC AGTTTCCGCT AGGCATGCCG ATGACGCTTG AGCGTCGCCT TGCCCTGCTC GAATGGGCGC ACCGGCGAGG CGCTCTCGTG ATCGAGGATG ACTATGACGG CGAATACCGC TTCGAGGGCA GACCGATGGA ATCATTGAAG AGTCTCGACA ACGCCGGAGT CGTTGCATAC GTTGGCACGT TTTCGAAGAC CATCTTTCCG GAACTGCGGA TTGGCTACAT GATTCCGCCG TCGTCCCTGG CGGCCACGCT TCGAAAGGCC AAACAGGTCA GTGACTGGCA TAGCAGCACC CTGATGCAGA CCGCATTGGG CAAGTTCATG CTGGACGGAT ACTTCGCCAA GCATCTGCGC CACATGCACC GGGAGTACGC CAGGCGACGC GCGACGCTGC TGGAGTACCT GCAGGGTGAC CTGGCCGACG TCTTCACGCC GCTACCGTCC GTGGCCGGCA TCCATCTGGT CGCGATACTG GCCGACGATA CAAACGAAGC AGACATCATT GCCCGGGCCA ACCAGGCATC GGTGGGCCTG TACGGCATTT CCAGGATGTT CAATACCCAG CCTTCGCGGC AAGGCATTCT GTTTGGCTAC GGCGGCATCG GTGTGGACGA TATACGGAGT GGCCTGACCC AACTCGGTGA AACACTTCGC GCCACCCGGC GTTGA
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Protein sequence | MWFRAAYSSS TPQLALESGG IAIRAYKMNA HIKLRGRRDL AGQIYRQIRA SIVDGRLAPG ERLPSTRTLA SELDVSRKTT LDVFERLIGE GYLRSRTGDG TFVSDEMTRL APTPPRERIV QATGAVWETL PEALPASRKD MPARFDFVGG VTDKRLFPFD KWRKCVSHAL RIQARGNGSY HDPSGDQELR LAISRYLASS RAVVSNWQDV IVTNGAQQAI ELLARAVIRP GDVIAVEDPG YPPARSVFTA AGARVIDVPV DKDGLRVDAL PSKARMVYVT PSHQFPLGMP MTLERRLALL EWAHRRGALV IEDDYDGEYR FEGRPMESLK SLDNAGVVAY VGTFSKTIFP ELRIGYMIPP SSLAATLRKA KQVSDWHSST LMQTALGKFM LDGYFAKHLR HMHREYARRR ATLLEYLQGD LADVFTPLPS VAGIHLVAIL ADDTNEADII ARANQASVGL YGISRMFNTQ PSRQGILFGY GGIGVDDIRS GLTQLGETLR ATRR
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