| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4299 |
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| Symbol | dctA |
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| ID | 4041157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 892359 |
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| End bp | 893717 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637979721 |
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| Product | C4-dicarboxylate transporter DctA |
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| Protein accession | YP_586434 |
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| Protein GI | 94313225 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00709019 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAAAAG TCGACAACCG AAAGCCGCTT TACAGATCCC TCTACTTCCA GGTCATCGTT
GCCATCATCA GCGGCGTGGT CCTCGGCCAC TATTATCCAA CTGCCGGAGA GGCCATGAAG
CCGTTGGGTG ACGGGTTCAT CAAGCTGATC AAGATGATCA TCGCGCCAAT CATCTTCTGC
ACAGTAGTGG TGGGCATTGC TGGCATGGAA GACATGAAGA AGGTCGGCAA GACCGGCGGG
TTGGCGCTGC TGTACTTCGA GGTCGTGAGC AGTATTGCAC TGCTGCTCGG CCTGTTGATC
ATCAACATCG TCAAGCCCGG GGCCGGAATG AACGTCGATC CATCCACCCT CGACACGAAA
GGGATCGCCG CCTACACCGG ACCCGGAAAG ATGCAGGGCA CGGTGGATTT TCTGATGAAC
GTGATTCCGA ACACGGTAGT GGATGCATTC GCAAAAGGTG AAATCCTCCA GGTACTGCTG
TTTGCGGTGA TGTTCGGCTT CGCGCTGCAC AAGTTCGGCG GCCGCGGCAC GCTGGTGTTC
GACTTCATCG AGAAATTCTC GCATGTGCTC TTTACCATCG TCGGCTACAT CATGAAAGTC
GCGCCACTTG GCGCTTTCGG CGCCATGGCC TTCACTATCG GCAAGTACGG AGTGAGTTCG
CTGCTACAAC TCGGCCAGTT GATGGCAACC TTTTACGCCA CTTGTCTGGT TTTCATCTTC
GTCGTGCTGG GTACCATTGC GCGACTGCAT GGATTTTCGA TTTGGAAGTT CATCAAGTAC
ATCAAGGAGG AACTGCTGAT TGTATTGGGC ACATCTTCCT CGGAATCCGT CTTGCCACGG
ATGATGGCCA AACTGGAGAA CTTGGGCGTC CGAAAGTCCG TCGTCGGACT GGTGATTCCA
ACTGGCTACT CCTTCAACCT GGACGGTACC TCCATATACC TGACCATGGC GGCTGTGTTC
ATCGCCCAGG CAACGAACAC CGACATGAAC CTGACGCAGC AACTCACGCT GCTCGCCGTG
CTGCTCCTGA CATCCAAGGG GGCCGCTGGG GTCACCGGGA GTGGTTTCAT CGTGCTCGCG
GCTACGCTAT CGGCGGTAGG GCATGTTCCG GTAGCGGGAC TTGCCTTGAT CCTCGGTATT
GATCGCTTCA TGTCGGAGGC ACGCGCCCTG ACCAACCTAA TTGGCAACGG CGTGGCCACG
GTGGTGGTGG CGAAGTGGAC CGGTGACCTC GATCTGGAAC GAATGCGTCG CAGACTGGAT
GACGAGACGG ATAGCGAAGC CGACGAGCCG GAAATGGTGC TCGACCAGAC GGCGACCCAT
ATGCCGGCCG TCGACCCTGC GGTAACCCGA CGCGGGTAG
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| Protein sequence | MEKVDNRKPL YRSLYFQVIV AIISGVVLGH YYPTAGEAMK PLGDGFIKLI KMIIAPIIFC
TVVVGIAGME DMKKVGKTGG LALLYFEVVS SIALLLGLLI INIVKPGAGM NVDPSTLDTK
GIAAYTGPGK MQGTVDFLMN VIPNTVVDAF AKGEILQVLL FAVMFGFALH KFGGRGTLVF
DFIEKFSHVL FTIVGYIMKV APLGAFGAMA FTIGKYGVSS LLQLGQLMAT FYATCLVFIF
VVLGTIARLH GFSIWKFIKY IKEELLIVLG TSSSESVLPR MMAKLENLGV RKSVVGLVIP
TGYSFNLDGT SIYLTMAAVF IAQATNTDMN LTQQLTLLAV LLLTSKGAAG VTGSGFIVLA
ATLSAVGHVP VAGLALILGI DRFMSEARAL TNLIGNGVAT VVVAKWTGDL DLERMRRRLD
DETDSEADEP EMVLDQTATH MPAVDPAVTR RG
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