Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4261 |
Symbol | |
ID | 4041119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 851295 |
End bp | 852206 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637979683 |
Product | LysR family transcriptional regulator |
Protein accession | YP_586396 |
Protein GI | 94313187 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.902003 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCATGC AAGACCTGAA CGATCTCTAC TACTTCGCGC AGTCTGTGGA GCATGGTGGA TTCGCCCCGG CAGGACGGGC ATTGGGCATG CCAAAATCCA AGCTGAGCCG CCGTATCGCC ATGTTGGAGG AACGCCTGGG CGTGCGGCTG ATACAGCGCT CGACCCGCCA GTTCGCCGTC ACCGAAATCG GCCGCGTCTA CTATGAGCAC TGCAAGGCCA TGCTGATGCA GGCAGAAGCC GCGCAGGAGG CTATCGAGGT CATACAGGCC GAACCACGGG GCACCCTGCG CATGACTTGC CCGGTGGCAC TCCTCCAGGT CCATGTCGGA ACGATTCTCA GCGAGTTCAT GGCACGGCAT CCCCTGTTGA CCGTTCATTT AGAGGCCACC AACCGGCGGG TCGATCCCGT TGCAGAGGCC ATCGATTTAG CCATCCGCGT GCGCCCGCCG CCGCTCCAGG ACAGCGACTT GGTCATCCGC GTACTGGCCG AGCGCAGCCA GTGCCTTGTT GCCAGCCCCG CGCTTGCCCA AGCCCATGGC ATGCCGCCTG CCCCCGCCGA ACTTTCGGAC TGGCCCAGCC TGGCCATCGG GACTCCCCAG CAGGATCACA CGTGGCACCT GTACGGGCCC GACGGCGTAC AGGCCACGAT CCATCACCGT CCACGTTTGG TAACTGGTGA CATGATTGCC TTGCGCAATG CGGCAGTGGC GGGGGTAGGC GTCTGTCAGT TGCCAGTGAT GATGGTGCGT GACCAGTTGA CAGATGGTTC CCTCGTCCGC TTGCTACCCG ACTGGGCGCC TCGGCGCGAA ATTCTTCATG CGGTTTTTCC CTCGCGGCGC GGCTTGCTGC CCGGCGTCAG ATTGCTGATT GACTACCTCG CCGAACGATT CGAAAAAATG GAAGAGGACT AG
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Protein sequence | MPMQDLNDLY YFAQSVEHGG FAPAGRALGM PKSKLSRRIA MLEERLGVRL IQRSTRQFAV TEIGRVYYEH CKAMLMQAEA AQEAIEVIQA EPRGTLRMTC PVALLQVHVG TILSEFMARH PLLTVHLEAT NRRVDPVAEA IDLAIRVRPP PLQDSDLVIR VLAERSQCLV ASPALAQAHG MPPAPAELSD WPSLAIGTPQ QDHTWHLYGP DGVQATIHHR PRLVTGDMIA LRNAAVAGVG VCQLPVMMVR DQLTDGSLVR LLPDWAPRRE ILHAVFPSRR GLLPGVRLLI DYLAERFEKM EED
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