| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4254 |
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| Symbol | |
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| ID | 4041112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 841982 |
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| End bp | 844027 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637979676 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_586389 |
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| Protein GI | 94313180 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000333563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATCC AACACGCATT CCGCCTGATC ACGCTTGCCA TGGTGGCGAC GATCGTGGGC
TTCGGCAGCT ATCTCTGGAC CGAGGAGTGG CGGGCATACG CCGTGGCGCA ACACAGCGAG
GCGATGCTCC AGGCCTTTCG CGCCACGCTG GTTGCCGCCG AGAAGGTCTC GGCCGAGCGG
GGGCCATCCA ATGCCGCGTT GGGCGCAGCG CCTGGCGTCG CCGCCGGCGC GCTGTTGCGA
GCGCGGGAAC AGAGTGACGC CAGTCTGACT GCGGCCATAG CAATGTTGCA CGGTGCCAAC
TGCCCGGAGT GCGGCGCGGC CAAAGGCAGC CTCGAGCATG CCCGGGCGCA GTTGGCGGCA
GCGCGGTCCC AGATCGACCG GCTAATCGCC CGGCCATTGT CGGAACGACA TGATGTGCAA
CGGGCCGTGA GCGGGATGTT CACCATCGTC GATGAGATCC TGCGCGTCGC GGACGGCCCG
CTGTCGCGCC TGCAGCGCTC CGCTCCTGTG GCGGCGCAGC ACGCGGTCAG TGCGCGATTT
GCCGCCGAAC TGCGCGAGTA TGCGGGTCGC GCCGGCTCCG AGTTCACCAG CGCACTGGTC
AGCAATCGTC CGATGCACAG CGAGGAGCGC GAGCGCCTGG CGGGGGATCT CGGGCGCGTG
CAGACGTTGG GGGACCAGAT CCAGCAGCGC GTCAGCTTCC AGTTGGCGTC GAAACCCGGG
CTACGCGACG CCGACACTGC GCTGCACAAG CGCTTTTTCG GTGACGGCCT CGCCTATCTC
CAGAAGGTCG AGGCGATCGG TCCGGCGGAA CCTCGGCCGA CGACGGCAGA GTTGGCCAGC
ACCTACGTGC CACTGATGGC GCCGATCGTC GCCATGCGCG ACGCCGTGCT CGACGTGGCT
CAGGCGGAAG TGCAGGCTGA CACGACGCGC GCGAAGAGAA GGCTTGGTGG CTTGTTGGCG
ATCCTCGCGA TCATCACGTC GTTTGTCGCA GCCACGTTCT GGCTGTTCGC GAAGCGGGTG
CTGCGTCCAC TTACGCTAGC GACGGAGGCC ACCGTTGAGC TGGCCGAGGG GCGATACGAC
GGGCCGACAC ATGTCTGGCC CAAGACCGAC GAGATTGGGG CCATCTTTGT CGCGCTGGAA
CAGTTGCGGG CGGGCCTGCT GCGGAAGGTG GCGCTCGAGC ATGAGCGCAC GACGCTGATC
GCGAGGCTGC AGGCGGCAGT CACGCACGAG CGTGCCCAGA TGATGGCGCT GGCCCAGGCG
CGCGACGCAG CCGAGGCCTC GGCGCGCACC AAGAGCAGCT TCCTGGCCAT GATGAGCCAC
GAGATCCGCA CGCCGTTGCA GGGCATCCTC GGCCTGCTGG AACTGGTGGA GTATTCGCCT
TTGTCAGCCG AACAGCGAAG GCAAGTGCGT CTGGCCTCGG AGGCAGGTCA GGCGCTGCGA
CAGATCCTCG ACGATGTGCT CGACTACGCC AAGATGGACG CGGGCCGGCT GCGTCTTGCG
TTAGCGCCAC TTGATTTGCG CGGGCTGTTC GCCAATGTGC TGAGCCTATT GGCGCCGCGC
GCGCAGGCCA AAGGGTTGCA GTTGCAGCAA TGGGTGCAGC CCGACGTTCC GGTTCAACTC
GTGGCCGACG GGGCTCGGCT GCGACAGATT CTTCTCAACC TCGTGGGCAA CGCGATCAAG
TTCACCGAGT GCGGCAGCGT GGATTTGCTC GCCAGTGTTG AGCCGACCAG CGCCGGCGAG
GACGTGCTGG TGGTCTCGGT GGCGGACACA GGCATCGGGA TCGCACCGGA GGATATTGCA
CGGCTCTTTA CCCCATTCGT GCAGGGCGAG AGCGGACCGG CGCGCCGTTT CGACGGAACC
GGACTGGGCC TGGCAATTTC TCGGCAACTG GCGCAACTGA TGGGAGGTGA GCTGATGCTC
GACAGTACAC TAGGTGTTGG TACGCAGGTG ATGCTGCGCG TGCCGATGCC GGGTTGCCCC
GACGCTGGAT CGCCCCTGTC GAACTCTGAG AGACGAGAGC ATCGCGCCGA GTTCAGGTTG
GCATAG
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| Protein sequence | MRIQHAFRLI TLAMVATIVG FGSYLWTEEW RAYAVAQHSE AMLQAFRATL VAAEKVSAER
GPSNAALGAA PGVAAGALLR AREQSDASLT AAIAMLHGAN CPECGAAKGS LEHARAQLAA
ARSQIDRLIA RPLSERHDVQ RAVSGMFTIV DEILRVADGP LSRLQRSAPV AAQHAVSARF
AAELREYAGR AGSEFTSALV SNRPMHSEER ERLAGDLGRV QTLGDQIQQR VSFQLASKPG
LRDADTALHK RFFGDGLAYL QKVEAIGPAE PRPTTAELAS TYVPLMAPIV AMRDAVLDVA
QAEVQADTTR AKRRLGGLLA ILAIITSFVA ATFWLFAKRV LRPLTLATEA TVELAEGRYD
GPTHVWPKTD EIGAIFVALE QLRAGLLRKV ALEHERTTLI ARLQAAVTHE RAQMMALAQA
RDAAEASART KSSFLAMMSH EIRTPLQGIL GLLELVEYSP LSAEQRRQVR LASEAGQALR
QILDDVLDYA KMDAGRLRLA LAPLDLRGLF ANVLSLLAPR AQAKGLQLQQ WVQPDVPVQL
VADGARLRQI LLNLVGNAIK FTECGSVDLL ASVEPTSAGE DVLVVSVADT GIGIAPEDIA
RLFTPFVQGE SGPARRFDGT GLGLAISRQL AQLMGGELML DSTLGVGTQV MLRVPMPGCP
DAGSPLSNSE RREHRAEFRL A
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