Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4242 |
Symbol | |
ID | 4041100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 829729 |
End bp | 830721 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637979665 |
Product | extra-cytoplasmic solute receptor |
Protein accession | YP_586378 |
Protein GI | 94313169 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.289881 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAGA CGAGACGATC GACGCTGCGG CTGGCCCTGG CCGCGACGGC CATGGCGACT GGCATGATGT CGGGCACGGC AACGGCGCAG GCGAACGCGT GGCCGAATCG CCCGATCCGA TTGATCGTGC CTTCGGCCGC TGGAGGTGCA GCGGATTTTG TCGCGCGGAC CTTCTCGGCC TTCCTGCAGA AGCGCCTGCC CGCGAACGCT GCCGTCGTGG TGGAGAATCG TCCGGGCGCT GGCGGCATCA TTGGCACCGA GGCGGCGAAG AGCGCGCCGG CCGACGGCTA TACCTTCCTG ATCGCATCCA ACTCGACACA TGCGGCCAAC GTCAGTCTGT ACCGGAACCT GCCCTACGAT CCTATCAAGG ACTTTGCGCC GGTCGGCATG TTCGGCACGT TCGGCACCAT CCTGGTGGTG CCGAAGAATA GTCCTTTCAA GTCGCTGCCT GAACTGATTC GCTATGCAAA AGCCCATCCA GGCAACATGA CCTACGGCTA TTACAGTTCC TCGTCGCGTG TCCCGCCAGA GCTGCTGCGC GTGCGCGCCG GGCTGGATTA CGCAGGTGCG CCTTACCGGA ACATCACGCA GATCATCACC GACATGCTTG GTGGGCAGAT CCAGTTCGCC TTTCTCGATT CGCTGTCTGC CGCCCCTGCG CTGCAAAACC CGATGCTCGC ACCGATCGCC GTCACGTCCT CGCAACGCAT GCCGCAGTTG GCTAGTGTCC CGACTGTCGC GGAGAGCCTG CAAGGATTCG AGGTACAGGG ATGGCTCGGC CTGACTGCAC CGGCAGGCAC GCCGGAAGAC GTGGTTAAGC GAATGAGTAC GCTGGTCTCC GACGCGATCA GTGAACCGGC AATACGGACC GCGCTGGAGC GGCAGGGTAT GGCGCCCAGG ACGATGACAC CTGAGGCCTT GCGTGCTCAC ATGGTGGCGG ACCGCTCGCG CTGGGCCGAA TGGACCAAAG CCGCCGGTAT CGAACCGGAA TAG
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Protein sequence | MNKTRRSTLR LALAATAMAT GMMSGTATAQ ANAWPNRPIR LIVPSAAGGA ADFVARTFSA FLQKRLPANA AVVVENRPGA GGIIGTEAAK SAPADGYTFL IASNSTHAAN VSLYRNLPYD PIKDFAPVGM FGTFGTILVV PKNSPFKSLP ELIRYAKAHP GNMTYGYYSS SSRVPPELLR VRAGLDYAGA PYRNITQIIT DMLGGQIQFA FLDSLSAAPA LQNPMLAPIA VTSSQRMPQL ASVPTVAESL QGFEVQGWLG LTAPAGTPED VVKRMSTLVS DAISEPAIRT ALERQGMAPR TMTPEALRAH MVADRSRWAE WTKAAGIEPE
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