| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4155 |
|---|
| Symbol | pelA |
|---|
| ID | 4041013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | + |
|---|
| Start bp | 731323 |
|---|
| End bp | 734184 |
|---|
| Gene Length | 2862 bp |
|---|
| Protein Length | 953 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637979578 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_586291 |
|---|
| Protein GI | 94313082 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3868] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR01370] possible cysteinyl-tRNA synthetase, Methanococcus type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.432055 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.180606 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGTGA TTGCCATTGT GGCAGCCGGT GTAGGGCTTG TGCTTGGCAC GCTGACGCCG
TCGACCGCGG CGCTGGCGCA GTCACCGGCG CCAGCGCGCG TCGCGCCGAG CGTGGCATTT
CACTATGGCG CCCGGCCGCC GGTGGACATG CTGCAGGCCT TCGACGTGGC CGTCGTGGAG
CCCGATAGCG GCTTCGATCC GCGTAGCGCC AGAACGCCGA ACACCGCCTG GTTCGCATAT
GTCAGCGTCG GCGAAGTCCT GCCGAGCCGC GCGTACTTCA AGGACATCCC CCAGGCCTGG
CTTTCCGGCA GCAATGACGC ATGGAACGCC AGAGTCGTCG ATCAGGCCGC CGACGGCTGG
CCTGCCTTCT ATGTCGACAA AGTAATCACG CCACTGTGGG AACGCGGCTA TCGCGGCTTT
TTCCTCGATA CGCTCGATTC GTACCATCTC GTGGCCAAGA CCGACGCCGA CCGCGCGCGT
CAGGAAGCCG GCATGGTGCG TGTGCTCCAG GCAATCAAGG CACGCTATCC AGACGCGAAG
CTGCTGTTCA ACCGTGGCTT TGAGATTCTG CCCCAGGTGC ATTCGCTGGC CTACGGCGTG
GTGTTTGAAT CGCTGTTCCG CGGCTGGAAC CAGGCGCAAG GCACGTACAC CGAAGTCAGT
CAGCAGGACC GTGACTGGTT GCTTAACCAG GCGCGCATCG TCCGCGAGCA GTACGGCCTG
CCCGTGATCT CGATCGACTA CTGCCCGCCC ACCGACGCCC AATGCCGACG CGACACCGCG
CGTCGCATCG GCGCGCTGGG CATCACTCCT TATGTCACCG ATTCCGGGCT GCAGACCGTG
GGCGTCGGGT CGTTCGAGGT CATGCCGCGC CGCGTGCTGG TGGTGCAGGA AAACGAACTC
GATGTTTCCA TCGACGACAG CGTCGGCGTG CGTTTCCTGT CGATGCCGCT CAACTATCTG
GGCTACCGCG TCGATTTCGC GGAAACGCGC GACACGTTGC CGGAGATCAC TCCCGACCGC
TATGCCGGCG TGGTGGTCTG GACCAACGGC AATATCCGCC AGAACCCGGG CCGCTTCTAC
GCCTGGGCGG AGAAACAGAT CCGCCAGGGC ATCCCCGTGG CCTTCATGAA TGGGTTTGGC
GCGCAGCCCG ACGGGGCGCT GGCACGGATG CTGGACCTGA AGGCAGTCAA GGGCCGCACC
TCGGGCGACG TCCAGATCCT GTCGCAGGAC AAGATGATGG GCTTCGAGCA GCAAGTGGCC
CCGGACCGTA CCGATGCGGT GCCGGTGCAG ATACGCGATG GCGCGGCGAA CACGCGCACG
CTGCTGCGCC TGCGTTCGGG CACGCTGACG TATGACGCCG CCGCGATCAC GGCCTGGGGC
GGCTATGTGA TGGGCCCCTA CGCCGTGCGG CAGAACACGC CCAAGGGGCA GGACCGCTGG
ATCGTGCAGC CGATCGACTT CCTGCGCGAG GCATTGCGCC TGCCGTTGAT GCCGGTCCCG
GATTCCACCA CCGAAAGCGG CCGCCGGCTG CTGACCATCC ATATCGATGG CGATGGGTTT
GCCTCGAAGG CTGAGATTCC CGGTGGCGGA TATTCGGGCG AGGTGCTGTT CCGCGAGATC
TTCGACCGGT ACCGCCTGCC GATGACGATG TCCGTGATCG AAGGCGAGGT CGGCAAAAGC
GGCATGTATC CGAAGCTGGC ACCGGAACTG GAGCCGATTG CCCGCAAGAT CTTCGCGCAG
CCGTATGTCG AGGTGGCCAG CCATACCTAT TCGCATCCGT TCGAATGGGG CCGGACCGTG
CCGGGACAGG AGAGTAACGC CAGGATCATC GAGGGCGATG ACACCTATCA CCTGGCAATT
CCGGGCTACA AGATGGACCT GAACCGTGAA ATCGGCGGCT CGATCGATTA CATCAACAAG
GTGCTGTCGC CGAACAAGCC GGTGAAGCTG GTGTTGTGGC CCGGTGACTG CCAGGCCCCG
CCCGAGGCGC TCAAGCTGAC CGAAGCCGCT GGCGTGCTGA ACATGAATGG CGGCGACACA
CTGATCACGC GCAGCAATCC GACCTGGACC GCCATCGCTC CGCTGGGCAT CCACAAGGCG
GATCACACGT TCCAGGTGTT CGCGACCAAC CAGAACGAGA ACGTCTATAC GAACCTGTGG
CATGGGCCGT ACTACGGCTT CGAGCGCGTG ATCGAAACGT TCGAGATGAC GGAGAAGCCG
TACCGCTTCA AGGCGGTGAA CATCTACTAC CACAGCTACT CGGGTACCAA GGTGGCATCG
CTGAAGGCGC TGCGCAAGGT CTATGACTAC GTGCTGACGC AGAACTTGCT GCCGATGCAT
TCCACCGACT ACGTGCTCAA GGTGATCGAC TGGCAGGGGA TGGCTGTGGC CCGCGAGTTG
GGCGATGGCG CCGACGGTGC GCCGGCCAGT GGCGCGTGGC GCGTGCGGGG CGATGGCAAC
CTGCGCAATC TGCGTTGGAC GGGCGCGGGC GTCCCCGACG TGGTCACCGC AACCGGCGTC
ACGGGTTCGT CGCCGGCGCC GGGCGGCGGC GTCTACGTGC ATCTGGATGG CGGCAACGCG
CGCTTCCGCT TCGTACCCAC GGCCACGCAG TCGGTGCCGG AGCTGCCCGA GGCCAACGGT
CTCGTGCGCG ACTGGCGCCG CGATGGCAAT GTCACCCGCT TTACCTTCGC CGGCTACTAC
AAGCCGTTCT TCCGGCTCGC CAACGCGGGC CAGTGCAGTG TTTCCATCGA TGGCAAGCCA
GTAACCGGTG TGCGCGATCG CAATACGCTG CGTTTCGATA CCCCGGCGGT CAATGATCCG
ATCCATGTCC AGCAACAAGT CGAAGTCCGC TGCGGCGCCT GA
|
|---|
| Protein sequence | MAVIAIVAAG VGLVLGTLTP STAALAQSPA PARVAPSVAF HYGARPPVDM LQAFDVAVVE
PDSGFDPRSA RTPNTAWFAY VSVGEVLPSR AYFKDIPQAW LSGSNDAWNA RVVDQAADGW
PAFYVDKVIT PLWERGYRGF FLDTLDSYHL VAKTDADRAR QEAGMVRVLQ AIKARYPDAK
LLFNRGFEIL PQVHSLAYGV VFESLFRGWN QAQGTYTEVS QQDRDWLLNQ ARIVREQYGL
PVISIDYCPP TDAQCRRDTA RRIGALGITP YVTDSGLQTV GVGSFEVMPR RVLVVQENEL
DVSIDDSVGV RFLSMPLNYL GYRVDFAETR DTLPEITPDR YAGVVVWTNG NIRQNPGRFY
AWAEKQIRQG IPVAFMNGFG AQPDGALARM LDLKAVKGRT SGDVQILSQD KMMGFEQQVA
PDRTDAVPVQ IRDGAANTRT LLRLRSGTLT YDAAAITAWG GYVMGPYAVR QNTPKGQDRW
IVQPIDFLRE ALRLPLMPVP DSTTESGRRL LTIHIDGDGF ASKAEIPGGG YSGEVLFREI
FDRYRLPMTM SVIEGEVGKS GMYPKLAPEL EPIARKIFAQ PYVEVASHTY SHPFEWGRTV
PGQESNARII EGDDTYHLAI PGYKMDLNRE IGGSIDYINK VLSPNKPVKL VLWPGDCQAP
PEALKLTEAA GVLNMNGGDT LITRSNPTWT AIAPLGIHKA DHTFQVFATN QNENVYTNLW
HGPYYGFERV IETFEMTEKP YRFKAVNIYY HSYSGTKVAS LKALRKVYDY VLTQNLLPMH
STDYVLKVID WQGMAVAREL GDGADGAPAS GAWRVRGDGN LRNLRWTGAG VPDVVTATGV
TGSSPAPGGG VYVHLDGGNA RFRFVPTATQ SVPELPEANG LVRDWRRDGN VTRFTFAGYY
KPFFRLANAG QCSVSIDGKP VTGVRDRNTL RFDTPAVNDP IHVQQQVEVR CGA
|
|---|
| |