| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4134 |
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| Symbol | pdhA |
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| ID | 4040992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 708407 |
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| End bp | 709510 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637979557 |
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| Product | putative puryvate dehydrogenase E1 component subunit alpha |
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| Protein accession | YP_586270 |
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| Protein GI | 94313061 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | [TIGR03181] pyruvate dehydrogenase E1 component, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.254713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGCACTG TTGCGCGTTT TGAAATCGGC TTTACCCGCT ACCTCTCCCC CGACGGCTCG
CCAGAGCCCG ACCTTCCCGA CTTTGCCCGC GATCCGGCCA CCCTGCTGCC GCTCTATCGC
GCCATGGTGC TGACCCGGCA GTTCGATCTC AAGGCCATCG CGATGCAACG TACCGGCCAG
ATCGGCACGT TCGCGTCCGC GCTGGGCCAG GAAGCGATCG GCGTCGGCGT GGCCACGGCG
ATGCGCCGCG ACGACGTGCT GGTGCCGTCG TACCGCGATC ATGCCGCGCA GTTTGTGCGG
GGCGTCACGA TGACGGAGAG CCTGCTGTAC TGGGGTGGCG ACGAACGCGG CAGCGCGTTT
GCCGCAGTGC CATATGACTT CGGCAACTGC GTGCCGATCG GCACCCAGGT TGGCCATGCG
GCCGGCGTGG CCTACACGTT CAAGCTGCGC CAGGCACCGA ACGTGGCGGT GTGCATCCTC
GGCGACGGCG GCACCTCGAA GGGTGACTTC TACGAGGGGA TGAACATGGC CGGCGCGTGG
CACGTCCCGC TGGTCATCGT TATCAACAAC AACCAGTGGG CCATCTCGAT GCCGCGCGCC
AAGCAGACGG CGGCGGCGAC GCTGGCCCAG AAGGCGATCG CAGCGGGCAT TCCGGGCGAA
CAGATCGACG GCAACGACGT GATTGCCGTG CGGCAGCGCG TTGGCGCGGC CATCGAACAT
GCGCGCCACG GCGGCGGGCC GACGTTGATC GAGGCGGTGA GCTACCGCCT GGGCGACCAT
ACGACAGCCG ATGATGCGTC GCGCTACCGG GACGAGGCAT CGGTCAAGGA AGCCTGGCGC
TGCGAGCCCA TTATCCGGCT GCGAGACTAC CTGGCCCGCC TCGGCGCCTG GGACGCCGCG
CAGGAAGAGG CGCTGATCAA GGAATGCCAG CAGGCCGTCG GCGCGGCCGT GCAGGCCTAT
CTTGCGCTGC CGCATCCCGA TGCATCGGCG ATGTTCGATT GCCTGTATGA AACGCTGCCC
GACGCCATGG CCGAACAACT CGACACCGCG CGGCAATACG ACGCCTCTGG CAAGACCGAT
ACCTCGGGAG CCCATCATGG CTGA
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| Protein sequence | MGTVARFEIG FTRYLSPDGS PEPDLPDFAR DPATLLPLYR AMVLTRQFDL KAIAMQRTGQ
IGTFASALGQ EAIGVGVATA MRRDDVLVPS YRDHAAQFVR GVTMTESLLY WGGDERGSAF
AAVPYDFGNC VPIGTQVGHA AGVAYTFKLR QAPNVAVCIL GDGGTSKGDF YEGMNMAGAW
HVPLVIVINN NQWAISMPRA KQTAAATLAQ KAIAAGIPGE QIDGNDVIAV RQRVGAAIEH
ARHGGGPTLI EAVSYRLGDH TTADDASRYR DEASVKEAWR CEPIIRLRDY LARLGAWDAA
QEEALIKECQ QAVGAAVQAY LALPHPDASA MFDCLYETLP DAMAEQLDTA RQYDASGKTD
TSGAHHG
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