| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4123 |
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| Symbol | hmyA |
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| ID | 4040981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 693623 |
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| End bp | 696694 |
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| Gene Length | 3072 bp |
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| Protein Length | 1023 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637979546 |
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| Product | heavy metal cation tricomponent efflux pump HmyA |
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| Protein accession | YP_586259 |
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| Protein GI | 94313050 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTGCGTGA TCGCCGTGGT GCTGTTCTTC TTTGGCCTGC GTGCGGCCGG GAAGCTCTCC
GTCGATGCGT TCCCGGACGT GACCAACGTC CAGGTGCAGA TCGCCACGGA AGCCACGGGA
CGGTCGCCTG AGGAAGTGGA GCGCTTTGTC ACGGTGCCGA TCGAGATGTC GATGACGGGC
CTGCCCGGAC TCGAGGAGAT GCGCTCGCTG AACAAGGCGG GCCTGTCGCT GATCACGCTT
GTGTTCACGG ACAAGACCGA CGTCTACTTC GCGCGGCAGC TCGTCATGGA GCGGCTGATC
GAGGTTTCCG GCCGAATGCC CGAGGGCGTG ACGCCGGTGC TCGGGCCGGT TTCTACCGGG
TTGGGCGAGG TCTACCAGTA CACGCTGGAC CGCGCCGACG ACGGCGACCG CGAACTGACG
CAGGAGGAAC TGTCGGAGCG CCGCATCGCG CAGGACTGGG TGGTGAGGCC GCTGCTGCGC
TCGATCCCGG GCGTGGCGGA AATCAACTCG CAGGGCGGCT TCGTGCGGCA GTACCAGGCA
CTGGTCAATC CGGAGCGGAT GCGCCACTAC GGGATCAACA TCCAGCAGGT CTACCAGGCG
CTGGCGCGTA ACAACGCCAA CTCCGGCGGT GGCGTGCTGC CGCATTACGC CGAGCAGTAC
CTGATTCGCG GCGTGGGCCT GGCCAAGGGT GTCGACGATA TCGGCAGCAT CGTGCTCAAG
GAGATCAACG GCACGCCGGT CTACCTGCGC GATGTGGCAC AGGTGACGAT CGGCCACGAG
GTCCGCCAGG GCGCGCTGGT CAAGAACGGC CAGACCGAGG CCGTTGGCGG CATCGTGATG
ATGATGCGCG GTGGCAACGC CAAGGAAGTG GTGAGCCGCG TCAAGGCTCG CGTGGCGGAT
ATCAACGAGC GTGGCATGTT GCCGGGCAAG CTGCAGATCG TGCCGTACTA CGACCGTAGC
GAACTGGTGG ACTCCGCGCT GTGGACCGTC ACCAAGGTGC TGCTCGAAGG CGTGGTGCTG
GTGGTGATCG TGCTGTTCCT GTTCCTGGGC GACGTGCGTT CCTCGGTGAT CGTGCTGGCC
ACGCTGGTGC TGACACCATT GCTGACGTTC ATCGTGATGA ACCAGGTGGG GCTGTCGGCC
AACCTGATGT CGCTGGGGGG GCTGGCCATC GCCATCGGCC TGATGGTCGA CGGCTCGGTC
GTGGTGGTCG AGAACGCGTT CGAGCGGCTC GGCCACGCGG AGAAAACCGG GCTGACGCGC
ACGCAGGTGC TGGTCAAGGC GGTGCAGGAA GTGGCCACGC CGGTGATCGT GGGCGTGGGC
ATCATCATCC TGGTGTTCCT GCCGCTGATG ACGCTGTCCG GCATGGAAGG CAAGATGTTC
GCGCCGCTGG CCTTCACGAT CTCGATCGCG CTGGCGATCT CGCTGTTCCT GTCGCTGACG
CTGTCGCCGG TGCTGTCGTC GTACCTGCTC AAGGGCGGCG CCGAACACGA CACGCGCGTC
ATCGCGTTCA TGAAGCGCTA CTACCTGCGC ATGCTTCACT GGTCGCTGGC AAACAGCAAG
AAGACCGTGC TGTCGGCGGT GGGGCTGTTC ATCGCCACGC TGATGATCGT GCCGCTGCTT
GGTACATCAT TCATTCCGGA GATGAAGGAA GGCTCGATCG TGCCGGCTAT CGACCGCGTG
CCGAACATCT CGCTGGAAGA GTCGATCAAG TTGGAGAAAC AGGCCAACAA GCTGGTGCTC
GAAGTGCCGG GCGTGAAGTC GGTGGTCTCG GGCGTGGGTC GTGGTGAAAG CCCGGCCGAC
CCGCAGGGTC AGAACGAATC GACGCCGATC GCCAGCCTCA AGGACCGCGA CGAGTGGCCC
GATGGCTGGA CGCAGGACGA CATCGCCAAC GCGATCCGCG AGAAGCTCAA GGCCATTCCC
GGCGTGCAGA TTGTGATGGC GCAGCCGATC TCGGACCGCG TGGACGAGAT GGTCAGTGGT
GTGCGTTCCG ATATCGCCGT GAAGATCTTC GGCGACGACC TGGAGACGCT GCGTGACCTG
GCCGGCCAGA TCGCCCGCGT GGCAGGTGGC ATCCAGGGGT CGCAGGACAT CCGTATCGAA
CGGATCTCGG GCCAGCAATA CCTGTCGATC GAGATCGACC GTCAGGCGAT TGCGCGGTAC
GGGCTGAACG TGTCGGACAT CCACGACATC ATCGAGATCG CCATCGGCGG CAAGCGTGCC
ACGGATATCT TCGAAGGCGA ACGTCGCTTT GCGGCGGCCG TACGTCTGCC CGAGGAATTC
CGCAGCAACG TGCAGGAGAT TCGCCAGTTG CTGGTATCGG CGCCCGATGG CGTGCAGGTG
CCGCTGCAGA GCGTGGCGAA GATCGAAGTG ACCGATGGTC CGGCGCAGAT CAGCCGCGAA
ATGGCCAAGC GCCGCGTGGT GGTGATGATC AACGTGAAGG ATCGCGATCT CGGCGGCTTC
GTGGCCGAAC TGCAGTCCGC CACCGAGAGC AAGGTCAAGC TGCCCGAGGG CTACTACTTC
GAGTGGGGCG GCCAGTTCCA GAACATGGAA CGCGCGATGG GCCACCTGAA GATCATCGTG
CCGATTACCA TCGCCGCGAT CTTCTTCCTG CTGTTCCTGC TGTTCAATTC GGTGCGCTAT
GCCACGCTGA TCATCACGGT GCTGCCGTTT GCATCGATCG GCGGCATCAT CGGGCTGTTC
GTCACGGGCG AGTACCTGTC CGTACCGGCG TCGGTGGGCT TTATCGCGCT GTGGGGCATG
GCGGTGCTGA ACGGGGTGGT GCTGGTGTCG TACATCCGCA CATTGCGCGA GTCGGGCATG
TCGCTGCGCA ACGCGGTGGT GCGCGGCGCC ACGCAGCGTT TCCGTCCGGT GATGATGACC
GCGACGATCG CCATGCTGGG TCTGGTGCCG TTCCTGTTCT CGACGGGCCC CGGCTCCGAG
GTGCAGCGTC CGCTGGCGGT GGTGGTGATC GGCGGGCTGA TCACGTCGAC GCTGCTCACG
CTGGTCATGG TGCCCACGCT GTACCGCTGG TTCGATGACC GCAAGCCGGA GCCGCGCGAC
ATGTCGGTGT AA
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| Protein sequence | MCVIAVVLFF FGLRAAGKLS VDAFPDVTNV QVQIATEATG RSPEEVERFV TVPIEMSMTG
LPGLEEMRSL NKAGLSLITL VFTDKTDVYF ARQLVMERLI EVSGRMPEGV TPVLGPVSTG
LGEVYQYTLD RADDGDRELT QEELSERRIA QDWVVRPLLR SIPGVAEINS QGGFVRQYQA
LVNPERMRHY GINIQQVYQA LARNNANSGG GVLPHYAEQY LIRGVGLAKG VDDIGSIVLK
EINGTPVYLR DVAQVTIGHE VRQGALVKNG QTEAVGGIVM MMRGGNAKEV VSRVKARVAD
INERGMLPGK LQIVPYYDRS ELVDSALWTV TKVLLEGVVL VVIVLFLFLG DVRSSVIVLA
TLVLTPLLTF IVMNQVGLSA NLMSLGGLAI AIGLMVDGSV VVVENAFERL GHAEKTGLTR
TQVLVKAVQE VATPVIVGVG IIILVFLPLM TLSGMEGKMF APLAFTISIA LAISLFLSLT
LSPVLSSYLL KGGAEHDTRV IAFMKRYYLR MLHWSLANSK KTVLSAVGLF IATLMIVPLL
GTSFIPEMKE GSIVPAIDRV PNISLEESIK LEKQANKLVL EVPGVKSVVS GVGRGESPAD
PQGQNESTPI ASLKDRDEWP DGWTQDDIAN AIREKLKAIP GVQIVMAQPI SDRVDEMVSG
VRSDIAVKIF GDDLETLRDL AGQIARVAGG IQGSQDIRIE RISGQQYLSI EIDRQAIARY
GLNVSDIHDI IEIAIGGKRA TDIFEGERRF AAAVRLPEEF RSNVQEIRQL LVSAPDGVQV
PLQSVAKIEV TDGPAQISRE MAKRRVVVMI NVKDRDLGGF VAELQSATES KVKLPEGYYF
EWGGQFQNME RAMGHLKIIV PITIAAIFFL LFLLFNSVRY ATLIITVLPF ASIGGIIGLF
VTGEYLSVPA SVGFIALWGM AVLNGVVLVS YIRTLRESGM SLRNAVVRGA TQRFRPVMMT
ATIAMLGLVP FLFSTGPGSE VQRPLAVVVI GGLITSTLLT LVMVPTLYRW FDDRKPEPRD
MSV
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